RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 BRINP2Q9C0B6 783 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 MUC3BQ9H195 1237 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CATSPERBQ9H7T0 1116 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 GORASP2Q9H8Y8 452 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 OR12D3Q9UGF7 316 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SFMBT1Q9UHJ3 866 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 A0A087WZ62 844 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 RAD51BO15315 384 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ANGPTL1O95841 491 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 NPR3P17342 541 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ARF4P18085 180 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CXCR3P49682 368 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 OLR1P78380 273 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PPP2R2BQ00005 443 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SP2Q02086 613 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 FADDQ13158 208 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 MAD2L1Q13257 205 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 KCNAB2Q13303 367 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TMEM132BQ14DG7 1078 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CTF1Q16619 201 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SV2CQ496J9 727 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 FBXO43Q4G163 708 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 UNC50Q53HI1 259 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 RABL3Q5HYI8 236 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PITRM1Q5JRX3 1037 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 KANK2Q63ZY3 851 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 POC5Q8NA72 575 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ST13P5Q8NFI4 369 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SLC38A4Q969I6 547 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PHF21BQ96EK2 531 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 C8orf37Q96NL8 207 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TOR3AQ9H497 397 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 NOL6Q9H6R4 1146 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ALG9Q9H6U8 611 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 FAM118AQ9NWS6 357 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 DDIT4Q9NX09 232 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ZBBXA8MT70 800 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PDZK1P1A8MUH7 402 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 NRP1O14786 923 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 MATN3O15232 486 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 RGS10O43665 173 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CCNKO75909 580 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CD1EP15812 388 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CD68P34810 354 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 YAP1P46937 504 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 HMGCS2P54868 508 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 GNG2P59768 71 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ISL1P61371 349 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PWP1Q13610 501 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SLC16A12Q6ZSM3 486 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 LRRC8DQ7L1W4 858 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 RIMKLAQ8IXN7 391 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 FBXO39Q8N4B4 442 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 OR6P1Q8NGX9 317 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SETD6Q8TBK2 473 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TMCO6Q96DC7 493 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SLC10A4Q96EP9 437 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TMEM209Q96SK2 561 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 DSEQ9UL01 958 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SLC1A7O00341 560 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 TPD52L2O43399 206 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 GABBR2O75899 941 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 RETP07949 1114 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 JUNDP17535 347 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 PTPRAP18433 802 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 RPS12P25398 132 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 OXTRP30559 389 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SERPINH1P50454 418 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 RENBPP51606 427 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 POLR2JP52435 117 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 MRPS15P82914 257 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ELP6Q0PNE2 266 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SPANXN2Q5MJ10 180 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ESRP1Q6NXG1 681 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ERAP2Q6P179 960 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SLC27A1Q6PCB7 646 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 CYHR1Q6ZMK1 362 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ZFP90Q8TF47 636 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 REXO5Q96IC2 774 aaKnown RBP4.75□□□□□ -1.65
PTPN13-201ENST00000316707 SLC25A51Q9H1U9 297 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF221Q9UK13 617 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 FBXW11Q9UKB1 542 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 GPR45Q9Y5Y3 372 aa4.75□□□□□ -1.65
PTPN13-201ENST00000316707 LOC110117498-PIK3R3F6TDL0 507 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 STX16O14662 325 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PIP5K1BO14986 540 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SLC25A27O95847 323 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 GMPRP36959 345 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ALDH7A1P49419 539 aaKnown RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 VAC14Q08AM6 782 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SMU1Q2TAY7 513 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ZIK1Q3SY52 487 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SPESP1Q6UW49 350 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 CHST15Q7LFX5 561 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-201ENST00000316707 TAS2R42Q7RTR8 314 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 ISCA2Q86U28 154 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 SLC22A16Q86VW1 577 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PSMA8Q8TAA3 256 aa4.74□□□□□ -1.65
PTPN13-201ENST00000316707 PIK3R3Q92569 461 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms