RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CD47Q08722 323 aa17.95■□□□□ 0.46
SPSB4-201ENST00000310546 NFYCQ13952 458 aa17.95■□□□□ 0.46
SPSB4-201ENST00000310546 RNF149Q8NC42 400 aa17.95■□□□□ 0.46
SPSB4-201ENST00000310546 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.95■□□□□ 0.46
SPSB4-201ENST00000310546 ZIC5Q96T25 663 aa17.95■□□□□ 0.46
SPSB4-201ENST00000310546 SH3GL1Q99961 368 aa17.95■□□□□ 0.46
SPSB4-201ENST00000310546 NTN4Q9HB63 628 aa17.95■□□□□ 0.46
SPSB4-201ENST00000310546 ZBTB24O43167 697 aaPredicted RBP17.94■□□□□ 0.46
SPSB4-201ENST00000310546 CHRNA1P02708 482 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 ZNF157P51786 506 aaPredicted RBP17.94■□□□□ 0.46
SPSB4-201ENST00000310546 BST2Q10589 180 aaKnown RBP17.94■□□□□ 0.46
SPSB4-201ENST00000310546 COLEC12Q5KU26 742 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 SIGIRRQ6IA17 410 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 RBM23Q86U06 439 aaKnown RBP17.94■□□□□ 0.46
SPSB4-201ENST00000310546 REM2Q8IYK8 340 aaPredicted RBP17.94■□□□□ 0.46
SPSB4-201ENST00000310546 HS3ST5Q8IZT8 346 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 RORBQ92753 470 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 CASS4Q9NQ75 786 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 FAM118AQ9NWS6 357 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 EVLQ9UI08 416 aaPredicted RBP17.94■□□□□ 0.46
SPSB4-201ENST00000310546 USP3Q9Y6I4 520 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 B4GALT4O60513 344 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 SOAT2O75908 522 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 GTF2E2P29084 291 aaKnown RBP17.94■□□□□ 0.46
SPSB4-201ENST00000310546 CDH13P55290 713 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 PPP1R8Q12972 351 aaKnown RBP17.94■□□□□ 0.46
SPSB4-201ENST00000310546 SPATC1Q76KD6 591 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 P2RY8Q86VZ1 359 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 MIER2Q8N344 545 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 SEPT1Q8WYJ6 367 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 OR2B2Q9GZK3 357 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 PCDHA9Q9Y5H5 950 aa17.94■□□□□ 0.46
SPSB4-201ENST00000310546 B4GALT5O43286 388 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 SCO2O43819 266 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 CRYZL1O95825 349 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 PCMT1P22061 227 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 MAP2K4P45985 399 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 GRB7Q14451 532 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 TTC23Q5W5X9 447 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 ANKRD34AQ69YU3 496 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 JADE1Q6IE81 842 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 LINC00299Q6ZSB3 139 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 FKBP9P1Q75LS8 142 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 STRADAQ7RTN6 431 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 SLC22A15Q8IZD6 547 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 PSD4Q8NDX1 1056 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 FAM83FQ8NEG4 500 aaPredicted RBP17.93■□□□□ 0.46
SPSB4-201ENST00000310546 ZNF555Q8NEP9 628 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 DYNC2LI1Q8TCX1 351 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 SMOC2Q9H3U7 446 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 IGKV6D-21A0A0A0MT36 114 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 PTPN3P26045 913 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 PSMB9P28065 219 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 KRT6CP48668 564 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 DNAJB13P59910 316 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 SOWAHAQ2M3V2 549 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 SNAP47Q5SQN1 464 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 ACOT1Q86TX2 421 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 ZDHHC13Q8IUH4 622 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 PLD3Q8IV08 490 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 MCFD2Q8NI22 146 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 RPL3LQ92901 407 aaKnown RBP17.93■□□□□ 0.46
SPSB4-201ENST00000310546 TMEM125Q96AQ2 219 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 HPDLQ96IR7 371 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 RPF1Q9H9Y2 349 aaKnown RBP17.93■□□□□ 0.46
SPSB4-201ENST00000310546 CDHR5Q9HBB8 845 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 NECTIN3Q9NQS3 549 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 ZNF221Q9UK13 617 aa17.93■□□□□ 0.46
SPSB4-201ENST00000310546 ZSCAN5BA6NJL1 495 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 GOLGA8CPA6NN73 597 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 SLC1A7O00341 560 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 SLC25A27O95847 323 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 NTRK1P04629 796 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 FYNP06241 537 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 LCP1P13796 627 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 TNFAIP2Q03169 654 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 SLX4IPQ5VYV7 408 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 BTBD8Q5XKL5 378 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 CCBE1Q6UXH8 406 aaPredicted RBP17.92■□□□□ 0.46
SPSB4-201ENST00000310546 FAR1Q8WVX9 515 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 NT5C1AQ9BXI3 368 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 SLAMF8Q9P0V8 285 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 ICMTO60725 284 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 CEP78Q5JTW2 689 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 EEF1DP3Q658K8 133 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 C7orf31Q8N865 590 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 RNF139Q8WU17 664 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 PHF10Q8WUB8 498 aaKnown RBP17.92■□□□□ 0.46
SPSB4-201ENST00000310546 AMBRA1Q9C0C7 1298 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 C6orf62Q9GZU0 229 aaPredicted RBP17.92■□□□□ 0.46
SPSB4-201ENST00000310546 ANGPTL3Q9Y5C1 460 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 LRRC37A2A6NM11 1700 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 UMPSP11172 480 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 POU6F1Q14863 301 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 METTL7BQ6UX53 244 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 CELF2-AS1Q8N7Q2 184 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 PAPD5Q8NDF8 572 aaKnown RBP17.92■□□□□ 0.46
SPSB4-201ENST00000310546 AFG1LQ8WV93 481 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 ELMO1Q92556 727 aa17.92■□□□□ 0.46
SPSB4-201ENST00000310546 DEPDC7Q96QD5 511 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms