RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 FUBP1Q96AE4 644 aaKnown RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 CCDC97Q96F63 343 aaPredicted RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 DEFB118Q96PH6 123 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 CLSTN3Q9BQT9 956 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 ELAC1Q9H777 363 aaKnown RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 NOL11Q9H8H0 719 aaKnown RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 GPBP1L1Q9HC44 474 aaPredicted RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 NDUFAF1Q9Y375 327 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 ILVBLA1L0T0 632 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 FAM149AA5PLN7 773 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 PFDN6O15212 129 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 TBC1D4O60343 1298 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 TRIM16O95361 564 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 APLP1P51693 650 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 INHBCP55103 352 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 RFTN1Q14699 578 aaPredicted RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 SAMD4BQ5PRF9 694 aaKnown RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 LYSMD3Q7Z3D4 306 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 DHFR2Q86XF0 187 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 FAM126BQ8IXS8 530 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 GPR150Q8NGU9 434 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 DDI1Q8WTU0 396 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 DLG3Q92796 817 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 TMEM169Q96HH4 297 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 CDK5RAP1Q96SZ6 601 aaKnown RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 PRPF18Q99633 342 aaKnown RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 INTS10Q9NVR2 710 aaKnown RBP11.47□□□□□ -0.57
PTPN2-201ENST00000309660 YIPF1Q9Y548 306 aa11.47□□□□□ -0.57
PTPN2-201ENST00000309660 CASQ2O14958 399 aaPredicted RBP11.46□□□□□ -0.57
PTPN2-201ENST00000309660 HOXA2O43364 376 aa11.46□□□□□ -0.57
PTPN2-201ENST00000309660 OR4F21O95013 312 aa11.46□□□□□ -0.57
PTPN2-201ENST00000309660 WISP3O95389 354 aaPredicted RBP11.46□□□□□ -0.57
PTPN2-201ENST00000309660 CHEK2O96017 543 aa11.46□□□□□ -0.57
PTPN2-201ENST00000309660 HMGA1P17096 107 aaKnown RBP11.46□□□□□ -0.57
PTPN2-201ENST00000309660 CKMT2P17540 419 aa11.46□□□□□ -0.57
PTPN2-201ENST00000309660 YBX1P67809 324 aaKnown RBP11.46□□□□□ -0.57
PTPN2-201ENST00000309660 SMARCB1Q12824 385 aa11.46□□□□□ -0.57
PTPN2-201ENST00000309660 PTRHD1Q6GMV3 140 aaKnown RBP11.46□□□□□ -0.57
PTPN2-201ENST00000309660 PDZD8Q8NEN9 1154 aa11.46□□□□□ -0.57
PTPN2-201ENST00000309660 CENPKQ9BS16 269 aa11.46□□□□□ -0.57
PTPN2-201ENST00000309660 PAPOLBQ9NRJ5 636 aaKnown RBP11.46□□□□□ -0.57
PTPN2-201ENST00000309660 ZDHHC7Q9NXF8 308 aa11.46□□□□□ -0.57
PTPN2-201ENST00000309660 EVLQ9UI08 416 aaPredicted RBP11.46□□□□□ -0.57
PTPN2-201ENST00000309660 TYW5A2RUC4 315 aaKnown RBP11.46□□□□□ -0.58
PTPN2-201ENST00000309660 LCHNA4D1U4 455 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 SAC3D1A6NKF1 404 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 SYCE1LA8MT33 242 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 COL6A1P12109 1028 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 UGT1A6P19224 532 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 GPX3P22352 226 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 CSKP41240 450 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 PIK3CGP48736 1102 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 TTPAP49638 278 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 CDKL1Q00532 357 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 GALNT1Q10472 559 aaPredicted RBP11.46□□□□□ -0.58
PTPN2-201ENST00000309660 TYSND1Q2T9J0 566 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 DEFB115Q30KQ5 88 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 SETMARQ53H47 684 aaPredicted RBP11.46□□□□□ -0.58
PTPN2-201ENST00000309660 GALNT7Q86SF2 657 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 SATL1Q86VE3 508 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 SPPL2CQ8IUH8 684 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 OR52B6Q8NGF0 335 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 WFDC5Q8TCV5 224 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 CANT1Q8WVQ1 401 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 BIRC8Q96P09 236 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 TSEN34Q9BSV6 310 aaKnown RBP11.46□□□□□ -0.58
PTPN2-201ENST00000309660 VN1R3Q9BXE9 311 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 TNKS2Q9H2K2 1166 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 PRM3Q9NNZ6 103 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 MTRRQ9UBK8 725 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 ZMYM5Q9UJ78 669 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 MYO7AQ13402 2215 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 PATJQ8NI35 1801 aa11.46□□□□□ -0.58
PTPN2-201ENST00000309660 OR6B1O95007 311 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 MT-ND1P03886 318 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 CKMP06732 381 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 HSPA8P11142 646 aaKnown RBP11.45□□□□□ -0.58
PTPN2-201ENST00000309660 GJA1P17302 382 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 HOXB8P17481 243 aaPredicted RBP11.45□□□□□ -0.58
PTPN2-201ENST00000309660 NFYCQ13952 458 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 TIGD2Q4W5G0 525 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 SLC8B1Q6J4K2 584 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 CXorf57Q6NSI4 855 aaKnown RBP11.45□□□□□ -0.58
PTPN2-201ENST00000309660 SLC30A9Q6PML9 568 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 DNAJB7Q7Z6W7 309 aaPredicted RBP11.45□□□□□ -0.58
PTPN2-201ENST00000309660 SYVN1Q86TM6 617 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 MYO1HQ8N1T3 1032 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 FNDC5Q8NAU1 212 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 ZNF461Q8TAF7 563 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 RHEBL1Q8TAI7 183 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 DERL2Q9GZP9 239 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 COQ10BQ9H8M1 238 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 SPATS2LQ9NUQ6 558 aaKnown RBP11.45□□□□□ -0.58
PTPN2-201ENST00000309660 UBAP1Q9NZ09 502 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 CR2P20023 1033 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 UGT1A1P22309 533 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 UGT1A4P22310 534 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 UGT1A3P35503 534 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 UGT1A5P35504 534 aa11.45□□□□□ -0.58
PTPN2-201ENST00000309660 NFKB2Q00653 900 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms