RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 RUVBL2Q9Y230 463 aaKnown RBP4□□□□□ -1.77
USH2A-201ENST00000307340 TLR6Q9Y2C9 796 aa4□□□□□ -1.77
USH2A-201ENST00000307340 RHOBTB1O94844 696 aa4□□□□□ -1.77
USH2A-201ENST00000307340 LY86O95711 162 aa4□□□□□ -1.77
USH2A-201ENST00000307340 HMGN1P05114 100 aa4□□□□□ -1.77
USH2A-201ENST00000307340 TCN1P20061 433 aaPredicted RBP4□□□□□ -1.77
USH2A-201ENST00000307340 SPP2Q13103 211 aa4□□□□□ -1.77
USH2A-201ENST00000307340 DPYSL3Q14195 570 aa4□□□□□ -1.77
USH2A-201ENST00000307340 KCNT2Q6UVM3 1135 aa4□□□□□ -1.77
USH2A-201ENST00000307340 SPERTQ8NA61 448 aa4□□□□□ -1.77
USH2A-201ENST00000307340 RPL36Q9Y3U8 105 aaKnown RBP4□□□□□ -1.77
USH2A-201ENST00000307340 A0A1B0GVM2 712 aa4□□□□□ -1.77
USH2A-201ENST00000307340 TCAF2A6NFQ2 919 aa4□□□□□ -1.77
USH2A-201ENST00000307340 PCDH17O14917 1159 aa4□□□□□ -1.77
USH2A-201ENST00000307340 AXIN1O15169 862 aa4□□□□□ -1.77
USH2A-201ENST00000307340 TLX3O43711 291 aaPredicted RBP4□□□□□ -1.77
USH2A-201ENST00000307340 NUAK1O60285 661 aa4□□□□□ -1.77
USH2A-201ENST00000307340 CYB5AP00167 134 aa4□□□□□ -1.77
USH2A-201ENST00000307340 HNF4AP41235 474 aa4□□□□□ -1.77
USH2A-201ENST00000307340 MAP2K4P45985 399 aa4□□□□□ -1.77
USH2A-201ENST00000307340 UBE2J2Q8N2K1 259 aa4□□□□□ -1.77
USH2A-201ENST00000307340 LRRC71Q8N4P6 559 aa4□□□□□ -1.77
USH2A-201ENST00000307340 FBXL18Q96ME1 805 aa4□□□□□ -1.77
USH2A-201ENST00000307340 C1QTNF1Q9BXJ1 281 aa4□□□□□ -1.77
USH2A-201ENST00000307340 PITRM1Q5JRX3 1037 aa4□□□□□ -1.77
USH2A-201ENST00000307340 GPRIN3Q6ZVF9 776 aa4□□□□□ -1.77
USH2A-201ENST00000307340 COLGALT1Q8NBJ5 622 aa4□□□□□ -1.77
USH2A-201ENST00000307340 CMASQ8NFW8 434 aaPredicted RBP4□□□□□ -1.77
USH2A-201ENST00000307340 SPPL2AQ8TCT8 520 aa4□□□□□ -1.77
USH2A-201ENST00000307340 RERGQ96A58 199 aaPredicted RBP4□□□□□ -1.77
USH2A-201ENST00000307340 MSANTD3Q96H12 275 aa4□□□□□ -1.77
USH2A-201ENST00000307340 VSTM5A8MXK1 200 aa4□□□□□ -1.77
USH2A-201ENST00000307340 E7ENX8 843 aa4□□□□□ -1.77
USH2A-201ENST00000307340 SLC25A12O75746 678 aa4□□□□□ -1.77
USH2A-201ENST00000307340 PSMD10O75832 226 aa4□□□□□ -1.77
USH2A-201ENST00000307340 RAB36O95755 333 aa4□□□□□ -1.77
USH2A-201ENST00000307340 FMR1Q06787 632 aaKnown RBP eCLIP4□□□□□ -1.77
USH2A-201ENST00000307340 MRPL41Q8IXM3 137 aaKnown RBP4□□□□□ -1.77
USH2A-201ENST00000307340 SYNE4Q8N205 404 aa4□□□□□ -1.77
USH2A-201ENST00000307340 UCK2Q9BZX2 261 aa4□□□□□ -1.77
USH2A-201ENST00000307340 USP29Q9HBJ7 922 aa4□□□□□ -1.77
USH2A-201ENST00000307340 CPNE5Q9HCH3 593 aa4□□□□□ -1.77
USH2A-201ENST00000307340 CARD8Q9Y2G2 431 aa4□□□□□ -1.77
USH2A-201ENST00000307340 ZFP37Q9Y6Q3 630 aaPredicted RBP4□□□□□ -1.77
USH2A-201ENST00000307340 PI15O43692 258 aa4□□□□□ -1.77
USH2A-201ENST00000307340 PGM3O95394 542 aa4□□□□□ -1.77
USH2A-201ENST00000307340 GPC1P35052 558 aa4□□□□□ -1.77
USH2A-201ENST00000307340 TOB1P50616 345 aaPredicted RBP4□□□□□ -1.77
USH2A-201ENST00000307340 DENND5BQ6ZUT9 1274 aa4□□□□□ -1.77
USH2A-201ENST00000307340 LRRC70Q7Z2Q7 622 aa4□□□□□ -1.77
USH2A-201ENST00000307340 UPF1Q92900 1129 aaKnown RBP eCLIP4□□□□□ -1.77
USH2A-201ENST00000307340 TFB2MQ9H5Q4 396 aaKnown RBP4□□□□□ -1.77
USH2A-201ENST00000307340 GPATCH2Q9NW75 528 aa4□□□□□ -1.77
USH2A-201ENST00000307340 FAM120CQ9NX05 1096 aaKnown RBP4□□□□□ -1.77
USH2A-201ENST00000307340 CKBP12277 381 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 GKP32189 559 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SCN4BQ8IWT1 228 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CHPFQ8IZ52 775 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 RASGEF1AQ8N9B8 481 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SMYD1Q8NB12 490 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 RUSC1Q9BVN2 902 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TRIT1Q9H3H1 467 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 ACTR8Q9H981 624 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 NLGN3Q9NZ94 848 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TMEM14AQ9Y6G1 99 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 MOXD2PA6NHM9 499 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 RAD17O75943 681 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 PLEKP08567 350 aaPredicted RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 ACADMP11310 421 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 S100A3P33764 101 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 DAB2P98082 770 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ACSM2AQ08AH3 577 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SGCGQ13326 291 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ACSM2BQ68CK6 577 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 FIP1L1Q6UN15 594 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 CYP2U1Q7Z449 544 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 ZNF786Q8N393 782 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SDR16C5Q8N3Y7 309 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 FNDC8Q8TC99 324 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 KAZALD1Q96I82 304 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TMEM120AQ9BXJ8 343 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TTYH3Q9C0H2 523 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 OR5K4A6NMS3 321 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 EDF1O60869 148 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 AP2A2O94973 939 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TGM6O95932 706 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TFRCP02786 760 aaKnown RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 RHOQP17081 205 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 CCNYL2Q5T2Q4 361 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 KIAA0930Q6ICG6 404 aaPredicted RBP3.99□□□□□ -1.77
USH2A-201ENST00000307340 ZNF440Q8IYI8 595 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 WFIKKN2Q8TEU8 576 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 MTMR8Q96EF0 704 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 YME1L1Q96TA2 773 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 SLC29A3Q9BZD2 475 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TNFRSF10BO14763 440 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 MSL3P1P0C860 447 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 KIR3DL1P43629 444 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 TMEM62Q0P6H9 643 aa3.99□□□□□ -1.77
USH2A-201ENST00000307340 DSG2Q14126 1118 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms