RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 KCTD3Q9Y597 815 aa10.9□□□□□ -0.66
CSPG4P1Y-201ENST00000306641 CCDC78A2IDD5 438 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 LMO7DNF2Z398 122 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DNALI1O14645 258 aaPredicted RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TPP1O14773 563 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NDC80O14777 642 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TNFSF14O43557 240 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 RALBP11234 206 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MSH3P20585 1137 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MC4RP32245 332 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GRIA1P42261 906 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MAGEA6P43360 314 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 POLD2P49005 469 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NPY2RP49146 381 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 RPIAP49247 311 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PRAMEP78395 509 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SIM1P81133 766 aaPredicted RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 C2orf54Q08AI8 447 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MSLNQ13421 630 aaPredicted RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NFATC2Q13469 925 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 LRP8Q14114 963 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 KCTD19Q17RG1 926 aaPredicted RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PCID2Q5JVF3 399 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TSTD2Q5T7W7 516 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CASC4Q6P4E1 433 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 AFTPHQ6ULP2 937 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MAATS1Q7Z4T9 603 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SNX20Q7Z614 316 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 LRRTM4Q86VH4 590 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 JAMLQ86YT9 394 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SLC25A45Q8N413 288 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SPATA4Q8NEY3 305 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 BAHD1Q8TBE0 780 aaPredicted RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ZNF398Q8TD17 642 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CPT1BQ92523 772 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PEX13Q92968 403 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DCUN1D1Q96GG9 259 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 KRT12Q99456 494 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TMEM168Q9H0V1 697 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 OR2AG1Q9H205 316 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 XAB2Q9HCS7 855 aaKnown RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ARFGAP3Q9NP61 516 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SMOXQ9NWM0 555 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TRNAU1APQ9NX07 287 aaKnown RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NCKIPSDQ9NZQ3 722 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ATXN10Q9UBB4 475 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ZNHIT2Q9UHR6 403 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CNOT6Q9ULM6 557 aaKnown RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 APOBEC2Q9Y235 224 aaKnown RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NEU2Q9Y3R4 380 aa10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 OAS3Q9Y6K5 1087 aaKnown RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GOLGA4Q13439 2230 aaKnown RBP10.89□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CEP250Q9BV73 2442 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SPAARA0A1B0GVQ0 90 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TCRBV7S3A2A0A539 114 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CFAP99D6REC4 459 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GOLGA8MH3BSY2 632 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 H7C0S8 307 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CCL22O00626 93 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GIPC1O14908 333 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TTI1O43156 1089 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GPR39O43194 453 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GRID2O43424 1007 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 SIGLEC6O43699 453 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 NUAK1O60285 661 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 UGT1A9O60656 530 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DNAJC6O75061 913 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CBFA2T3O75081 653 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MTX2O75431 263 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TMEM63AO94886 807 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CDK14O94921 469 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CELA2BP08218 269 aaPredicted RBP10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ZNF8P17098 575 aaPredicted RBP10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PAMP19021 973 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 UGT1A6P19224 532 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 UGT1A1P22309 533 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 UGT1A4P22310 534 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MGAT1P26572 445 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 UGT1A3P35503 534 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 UGT1A5P35504 534 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DUSP3P51452 185 aaPredicted RBP10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TUBB2AQ13885 445 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 WHAMMP3Q1A5X7 153 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 INSCQ1MX18 579 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PYCR3Q53H96 274 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 C6orf132Q5T0Z8 1188 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 GPRC6AQ5T6X5 926 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ANKRD22Q5VYY1 191 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 IZUMO3Q5VZ72 239 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 KCTD16Q68DU8 428 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 LVRNQ6Q4G3 990 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 CRTC3Q6UUV7 619 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 ADGRG6Q86SQ4 1221 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 HOOK3Q86VS8 718 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 TRAPPC5Q8IUR0 188 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 MCUQ8NE86 351 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 DDHD1Q8NEL9 900 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 KIF18AQ8NI77 898 aa10.88□□□□□ -0.67
CSPG4P1Y-201ENST00000306641 PTCD2Q8WV60 388 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms