RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 KIAA0408Q6ZU52 694 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 AMER2Q8N7J2 671 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 AFG1LQ8WV93 481 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 COLEC11Q9BWP8 271 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 DUSP16Q9BY84 665 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 ACTR8Q9H981 624 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 PCDHB3Q9Y5E6 796 aa12.97□□□□□ -0.33
TRIM35-201ENST00000305364 MAGED1Q9Y5V3 778 aaPredicted RBP12.97□□□□□ -0.33
TRIM35-201ENST00000305364 CNTNAP1P78357 1384 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 H0YAE9 185 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 INMTO95050 263 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 PIRTP0C851 137 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 RAP2AP10114 183 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 C7P10643 843 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 CD86P42081 329 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 CYBRD1Q53TN4 286 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 TECRLQ5HYJ1 363 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 TIGD7Q6NT04 549 aaPredicted RBP12.96□□□□□ -0.33
TRIM35-201ENST00000305364 PIM3Q86V86 326 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 SPNS2Q8IVW8 549 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 SMG8Q8ND04 991 aaKnown RBP12.96□□□□□ -0.33
TRIM35-201ENST00000305364 STAG3L4Q8TBR4 150 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 SKA2Q8WVK7 121 aaPredicted RBP12.96□□□□□ -0.33
TRIM35-201ENST00000305364 SLC47A1Q96FL8 570 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 OSMRQ99650 979 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 SH3GL1Q99961 368 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 APOL4Q9BPW4 351 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 RBM4BQ9BQ04 359 aaKnown RBP12.96□□□□□ -0.33
TRIM35-201ENST00000305364 RBM4Q9BWF3 364 aaKnown RBP12.96□□□□□ -0.33
TRIM35-201ENST00000305364 IST1P53990 364 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 CELF3Q5SZQ8 465 aaKnown RBP12.96□□□□□ -0.33
TRIM35-201ENST00000305364 ARMC4Q5T2S8 1044 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 ANGPTL8Q6UXH0 198 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 HACD2Q6Y1H2 254 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 SNX27Q96L92 541 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 VTA1Q9NP79 307 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 TRMT13Q9NUP7 481 aaKnown RBP12.96□□□□□ -0.33
TRIM35-201ENST00000305364 BTBD3Q9Y2F9 522 aa12.96□□□□□ -0.33
TRIM35-201ENST00000305364 CENPXA8MT69 81 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 HSD17B1P14061 328 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 MSH3P20585 1137 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 FMO4P31512 558 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 PFKPQ01813 784 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 WSCD1Q658N2 575 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 CATSPERGQ6ZRH7 1159 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 EPHX4Q8IUS5 362 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 MINDY1Q8N5J2 469 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.96□□□□□ -0.34
TRIM35-201ENST00000305364 PPP1R13LQ8WUF5 828 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 ALPK1Q96QP1 1244 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 DKK3Q9UBP4 350 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 CD300AQ9UGN4 299 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 SNX8Q9Y5X2 465 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 UFM1P61960 85 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 HERVK_113P63132 956 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 PLEKHG7Q6ZR37 379 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 MILR1Q7Z6M3 343 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 CADM3Q8N126 398 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 OR13F1Q8NGS4 319 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 ACOX2Q99424 681 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 ERVK-6Q9BXR3 956 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 LRRC3Q9BY71 257 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 WDR70Q9NW82 654 aa12.96□□□□□ -0.34
TRIM35-201ENST00000305364 A0A1W2PP18 115 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 OR51F1A6NGY5 319 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 TULP3O75386 442 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 CDH1P12830 882 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 NR4A2P43354 598 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 KCNAB2Q13303 367 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 SYT16Q17RD7 645 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 MARC1Q5VT66 337 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 PLPPR4Q7Z2D5 763 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 METTL23Q86XA0 190 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 OR56A4Q8NGH8 313 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 C3orf30Q96M34 536 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 OSBPL2Q9H1P3 480 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 B3GNT3Q9Y2A9 372 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 LOXHD1Q8IVV2 1947 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 LRRC14BA6NHZ5 514 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 YJEFN3A6XGL0 299 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 WDR47O94967 919 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 PGLSO95336 258 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 RCVRNP35243 200 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 EEFSECP57772 596 aaKnown RBP12.95□□□□□ -0.34
TRIM35-201ENST00000305364 C9orf57Q5W0N0 161 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 DPY30Q9C005 99 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 NUAK2Q9H093 628 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 RNF38Q9H0F5 515 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 ZMYM5Q9UJ78 669 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 ZNF221Q9UK13 617 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 EIF3LQ9Y262 564 aaKnown RBP12.95□□□□□ -0.34
TRIM35-201ENST00000305364 NOTOA8MTQ0 251 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 FAM155AB1AL88 458 aaPredicted RBP12.95□□□□□ -0.34
TRIM35-201ENST00000305364 GSTM2P28161 218 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 CD68P34810 354 aaPredicted RBP12.95□□□□□ -0.34
TRIM35-201ENST00000305364 IDUAP35475 653 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 MAGEA12P43365 314 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 PHC1P78364 1004 aa12.95□□□□□ -0.34
TRIM35-201ENST00000305364 SLC27A1Q6PCB7 646 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms