RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 KLHDC8BQ8IXV7 354 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 EXOC8Q8IYI6 725 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 PPHLN1Q8NEY8 458 aaKnown RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 TXNDC15Q96J42 360 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 SMOC2Q9H3U7 446 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NOL6Q9H6R4 1146 aaKnown RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 CARS2Q9HA77 564 aaKnown RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 MID1IP1Q9NPA3 183 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 BRCA1P38398 1863 aaKnown RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 DOCK1Q14185 1865 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 ZSWIM8A7E2V4 1837 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 BRCA2P51587 3418 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 A0A1W2PP18 115 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 C16orf96A6NNT2 1141 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 TTC34A8MYJ7 566 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 PTGES3LE9PB15 166 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 MTSS1O43312 755 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NUAK1O60285 661 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 LINC00032P0C843 101 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 CDH1P12830 882 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 RABGGTBP53611 331 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 ILF2Q12905 390 aaKnown RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 RCAN2Q14206 197 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NDUFA5Q16718 116 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 HIST2H2ACQ16777 129 aaPredicted RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 FAM187BQ17R55 369 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 COQ5Q5HYK3 327 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 KDELC2Q7Z4H8 507 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 ISCA2Q86U28 154 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 AKAP14Q86UN6 197 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 UNC93AQ86WB7 457 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 ARMC8Q8IUR7 673 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 FAM86B1Q8N7N1 296 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 OR13J1Q8NGT2 312 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 FAR1Q8WVX9 515 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 CCDC90BQ9GZT6 254 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NACA2Q9H009 215 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 TP63Q9H3D4 680 aaPredicted RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 POLR3BQ9NW08 1133 aaPredicted RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 GPR45Q9Y5Y3 372 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 SOWAHBA6NEL2 793 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 KCNK2O95069 426 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 FYNP06241 537 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 EDNRBP24530 442 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 SERPINB1P30740 379 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 EIF2DP41214 584 aaKnown RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 TPD52P55327 224 aaPredicted RBP10.82□□□□□ -0.68
ZNF558-201ENST00000301475 HERVK_113P63132 956 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 RPS6KA2Q15349 733 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 FXNQ16595 210 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 SPATS1Q496A3 300 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 LINC00299Q6ZSB3 139 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 DTWD1Q8N5C7 304 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 DYNC2LI1Q8TCX1 351 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 GLMNQ92990 594 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NODALQ96S42 347 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 VAT1Q99536 393 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 ERVK-6Q9BXR3 956 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 NFKBIZQ9BYH8 718 aa10.82□□□□□ -0.68
ZNF558-201ENST00000301475 DICER1Q9UPY3 1922 aaKnown RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 CEP350Q5VT06 3117 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 ZNF236Q9UL36 1845 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 ZNF99A8MXY4 864 aaPredicted RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 M0R3G1 203 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 FZD9O00144 591 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 CLDN5O00501 218 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 AZIN1O14977 448 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 XPNPEP2O43895 674 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 CACNG3O60359 315 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 DEAF1O75398 565 aaPredicted RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 LRIG2O94898 1065 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 C22orf31O95567 290 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 VTNP04004 478 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 LBPP18428 481 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 PAX3P23760 479 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 TGFBR1P36897 503 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 CDKN2DP55273 166 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 EEFSECP57772 596 aaKnown RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 NCS1P62166 190 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 EMX1Q04741 257 aaPredicted RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 KCNAB2Q13303 367 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 KANK2Q63ZY3 851 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 KIAA0930Q6ICG6 404 aaPredicted RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 PRR23BQ6ZRT6 265 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 USP43Q70EL4 1123 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 UTS2BQ765I0 119 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 CTU1Q7Z7A3 348 aaKnown RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 RALGPS2Q86X27 583 aaPredicted RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 ABI1Q8IZP0 508 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 PSMA8Q8TAA3 256 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 ZNF486Q96H40 463 aaPredicted RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 NSMCE2Q96MF7 247 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 STAP1Q9ULZ2 295 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 SNX5Q9Y5X3 404 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 SLC22A1O15245 554 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 GUCY1B2O75343 617 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 CNTN5O94779 1100 aa10.81□□□□□ -0.68
ZNF558-201ENST00000301475 WISP3O95389 354 aaPredicted RBP10.81□□□□□ -0.68
ZNF558-201ENST00000301475 CHRNA1P02708 482 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms