RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 MAP4P27816 1152 aaKnown RBP20.06■□□□□ 0.8
HPS6-201ENST00000299238 OPRL1P41146 370 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 ACLYP53396 1101 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 IFITM3Q01628 133 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 TRAF7Q6Q0C0 670 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 KIAA0408Q6ZU52 694 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 PGAM4Q8N0Y7 254 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 SLC39A13Q96H72 371 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 FUBP3Q96I24 572 aaKnown RBP eCLIP20.06■□□□□ 0.8
HPS6-201ENST00000299238 ZNF641Q96N77 438 aaPredicted RBP20.06■□□□□ 0.8
HPS6-201ENST00000299238 SLC25A51Q9H1U9 297 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 NANOGQ9H9S0 305 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 GMIPQ9P107 970 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 B3GNT3Q9Y2A9 372 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 SLC30A1Q9Y6M5 507 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 TCAF2A6NFQ2 919 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 WASH4PA8MWX3 477 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 SNAP91O60641 907 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 BMPR1AP36894 532 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 ART3Q13508 389 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 TECRLQ5HYJ1 363 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 TFAP2DQ7Z6R9 452 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 LRRC49Q8IUZ0 686 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 ZNF420Q8TAQ5 688 aaPredicted RBP20.06■□□□□ 0.8
HPS6-201ENST00000299238 C1orf74Q96LT6 269 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 RABL2AQ9UBK7 228 aaPredicted RBP20.06■□□□□ 0.8
HPS6-201ENST00000299238 MOSPD1Q9UJG1 213 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 CLASP2O75122 1294 aaKnown RBP20.06■□□□□ 0.8
HPS6-201ENST00000299238 TSPAN8P19075 237 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 MATN1P21941 496 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 TBX4P57082 545 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 NFE2Q16621 373 aaPredicted RBP20.06■□□□□ 0.8
HPS6-201ENST00000299238 NHSL2Q5HYW2 709 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 PCDH20Q8N6Y1 951 aaKnown RBP20.06■□□□□ 0.8
HPS6-201ENST00000299238 PHF21BQ96EK2 531 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 C8orf48Q96LL4 319 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 FBXO44Q9H4M3 255 aa20.06■□□□□ 0.8
HPS6-201ENST00000299238 NOL11Q9H8H0 719 aaKnown RBP20.06■□□□□ 0.8
HPS6-201ENST00000299238 ACOT8O14734 319 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 BCAS2O75934 225 aaPredicted RBP20.05■□□□□ 0.8
HPS6-201ENST00000299238 HNRNPFP52597 415 aaKnown RBP20.05■□□□□ 0.8
HPS6-201ENST00000299238 IHHQ14623 411 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 WDR45BQ5MNZ6 344 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 RNF180Q86T96 592 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 PELI3Q8N2H9 469 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 ELMOD1Q8N336 334 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 TTC9BQ8N6N2 239 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 ATP6V0D2Q8N8Y2 350 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 CALML6Q8TD86 181 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 IMP4Q96G21 291 aaKnown RBP20.05■□□□□ 0.8
HPS6-201ENST00000299238 FNIP2Q9P278 1114 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 ABT1Q9ULW3 272 aaKnown RBP20.05■□□□□ 0.8
HPS6-201ENST00000299238 TRPC5OSA6NMA1 111 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 SOCS2O14508 198 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 KPNA2P52292 529 aaKnown RBP20.05■□□□□ 0.8
HPS6-201ENST00000299238 SLC12A2P55011 1212 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 RFTN1Q14699 578 aaPredicted RBP20.05■□□□□ 0.8
HPS6-201ENST00000299238 PPP1R3AQ16821 1122 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 VARS2Q5ST30 1063 aaKnown RBP20.05■□□□□ 0.8
HPS6-201ENST00000299238 AGAP7PQ5VUJ5 663 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 ZNF683Q8IZ20 524 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 KLHL5Q96PQ7 755 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 PCDHAC1Q9H158 963 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 PRDM5Q9NQX1 630 aaPredicted RBP20.05■□□□□ 0.8
HPS6-201ENST00000299238 POLE4Q9NR33 117 aa20.05■□□□□ 0.8
HPS6-201ENST00000299238 LOC105371267A0A1B0GV96 52 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 HEATR9A2RTY3 570 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 SLC2A3P11169 496 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 ME2P23368 584 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 YAP1P46937 504 aaKnown RBP20.04■□□□□ 0.8
HPS6-201ENST00000299238 LEPRP48357 1165 aaKnown RBP20.04■□□□□ 0.8
HPS6-201ENST00000299238 TNK2Q07912 1038 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 EFEMP1Q12805 493 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 UMODL1-AS1Q8N2C9 162 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 OR13J1Q8NGT2 312 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 FAM110BQ8TC76 370 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 GPR152Q8TDT2 470 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 SH3RF2Q8TEC5 729 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 HMCESQ96FZ2 354 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 EFCAB1Q9HAE3 211 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 RNF186Q9NXI6 227 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 ANKMY1Q9P2S6 941 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 PCDHB5Q9Y5E4 795 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 BCL10O95999 233 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 HSPA1AP0DMV8 641 aaKnown RBP20.04■□□□□ 0.8
HPS6-201ENST00000299238 HSPA1BP0DMV9 641 aaKnown RBP20.04■□□□□ 0.8
HPS6-201ENST00000299238 CCNA2P20248 432 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 ITKQ08881 620 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 SLC14A2Q15849 920 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 MS4A13Q5J8X5 152 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 CYP2U1Q7Z449 544 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 ADAMTS16Q8TE57 1224 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 TBC1D14Q9P2M4 693 aa20.04■□□□□ 0.8
HPS6-201ENST00000299238 TRIM64BA6NI03 449 aa20.03■□□□□ 0.8
HPS6-201ENST00000299238 A8MT66 165 aa20.03■□□□□ 0.8
HPS6-201ENST00000299238 CLPXO76031 633 aa20.03■□□□□ 0.8
HPS6-201ENST00000299238 CNTN5O94779 1100 aa20.03■□□□□ 0.8
HPS6-201ENST00000299238 MMP2P08253 660 aa20.03■□□□□ 0.8
HPS6-201ENST00000299238 RHOQP17081 205 aa20.03■□□□□ 0.8
HPS6-201ENST00000299238 SERPINH1P50454 418 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms