RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 HOXA6P31267 233 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 IFNA8P32881 189 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 SPAM1P38567 509 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 CRY1Q16526 586 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 TYSND1Q2T9J0 566 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 C2orf27AQ580R0 203 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 PRR23BQ6ZRT6 265 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 ZNF669Q96BR6 464 aaPredicted RBP8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 PPP1R36Q96LQ0 422 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 C9orf72Q96LT7 481 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 COQ10AQ96MF6 247 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 TCF12Q99081 682 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 LMAN1LQ9HAT1 526 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 INTS10Q9NVR2 710 aaKnown RBP8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 NCKAP1Q9Y2A7 1128 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 FADS3Q9Y5Q0 445 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 ARL5AQ9Y689 179 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 PLXNB3Q9ULL4 1909 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 LAMA3Q16787 3333 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 NDUFS2O75306 463 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 C1SP09871 688 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ADARP55265 1226 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 CACNG1Q06432 222 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 DPTQ07507 201 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 CNGA3Q16281 694 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 KCTD19Q17RG1 926 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 C6orf10Q5SRN2 563 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 GRTP1Q5TC63 336 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 LRRC66Q68CR7 880 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 FBXL19Q6PCT2 694 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 TRIM69Q86WT6 500 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 AADATQ8N5Z0 425 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 C2CD4AQ8NCU7 369 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC44A1Q8WWI5 657 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 MTBPQ96DY7 904 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 AHCYL2Q96HN2 611 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 VPS35Q96QK1 796 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ZNF446Q9NWS9 450 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 EURLQ9NYK6 297 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 AKAP7Q9P0M2 348 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 B4GALT6Q9UBX8 382 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 EBF1Q9UH73 591 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 TRBV5-4A0A0C4DH59 114 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 IL1BP01584 269 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ARNTP27540 789 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 DRD3P35462 400 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 GPR33Q49SQ1 333 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 SNAP47Q5SQN1 464 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ADGRD1Q6QNK2 874 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 LYSMD3Q7Z3D4 306 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 MMAAQ8IVH4 418 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 TRAM1L1Q8N609 369 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 HEXDCQ8WVB3 486 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 SDCCAG3Q96C92 435 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 DRC3Q9H069 523 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 PSMC3IPQ9P2W1 217 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 C1orf232A0A0U1RR37 186 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 AGAP14A8MT82 685 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ZNF217O75362 1048 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ALPIP09923 528 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC8A1P32418 973 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ABL2P42684 1182 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 KPNA2P52292 529 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 PTSQ03393 145 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 TEDDM1Q5T9Z0 273 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 TECPR1Q7Z6L1 1165 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ISL2Q96A47 359 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 SKA1Q96BD8 255 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 PGM2Q96G03 612 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ZIM3Q96PE6 472 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 MUTYHQ9UIF7 546 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ACACAQ13085 2346 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 TCRBV21S2A2A0A5A6 115 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 TOR1BO14657 336 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 CD9P21926 228 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 SSTR1P30872 391 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ZNF844Q08AG5 666 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 DNAJC3Q13217 504 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 MAP7Q14244 749 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 UAP1L1Q3KQV9 507 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 AGBL2Q5U5Z8 902 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 PACS1Q6VY07 963 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 SNX20Q7Z614 316 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 LRRC6Q86X45 466 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 OR4L1Q8NH43 312 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ZSCAN5AQ9BUG6 496 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 MTG2Q9H4K7 406 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 PRMT8Q9NR22 394 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 CATSPERZQ9NTU4 200 aa8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 C20orf96Q9NUD7 363 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-201ENST00000288976 ARHGAP10A1A4S6 786 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 FAM170BA6NMN3 283 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 MID1O15344 667 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 CDH16O75309 829 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 APBB3O95704 486 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 LHCGRP22888 699 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 TYK2P29597 1187 aa8.37□□□□□ -1.07
PTPDC1-201ENST00000288976 LEPRP48357 1165 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms