RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 CD3GP09693 182 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 LINGO3P0C6S8 592 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 IL1R1P14778 569 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 ALDH4A1P30038 563 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 CDC25CP30307 473 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 FMO5P49326 533 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 GPR15P49685 360 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 FXR1P51114 621 aaKnown RBP eCLIP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PSPHP78330 225 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 CHAF1BQ13112 559 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PUM1Q14671 1186 aaKnown RBP eCLIP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 GRM3Q14832 879 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 NFE2Q16621 373 aaPredicted RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 GFOD2Q3B7J2 385 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 NOMO2Q5JPE7 1267 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 ARL6IP4Q66PJ3 421 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 MRNIPQ6NTE8 343 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 POLNQ7Z5Q5 900 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 TMEM200AQ86VY9 491 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PNPT1Q8TCS8 783 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 FAM136AQ96C01 138 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 AMDHD1Q96NU7 426 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 KLF6Q99612 283 aaPredicted RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 CCDC106Q9BWC9 280 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 POLR1EQ9GZS1 481 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 ELOVL6Q9H5J4 265 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 SP140LQ9H930 580 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 RBM12Q9NTZ6 932 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 TCAF2A6NFQ2 919 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 KLRF2D3W0D1 207 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 UBE2Q2LH0YL09 131 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 KCNQ2O43526 872 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 SERPINE1P05121 402 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 TMEM11P17152 192 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PCMT1P22061 227 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 CYP2F1P24903 491 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 DDX6P26196 483 aaKnown RBP eCLIP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PSMB9P28065 219 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 MXI1P50539 228 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 XKR3Q5GH77 459 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 INTS6LQ5JSJ4 861 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 FAM69AQ5T7M9 428 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 NIPAL3Q6P499 406 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 SLC29A4Q7RTT9 530 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 KBTBD2Q8IY47 623 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 SYNPOQ8N3V7 929 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 TCEANCQ8N8B7 351 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PNLDC1Q8NA58 520 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 OR56B2PQ8NGI1 322 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 RHBDD1Q8TEB9 315 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 STARD8Q92502 1023 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 INTS12Q96CB8 462 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 COQ8BQ96D53 544 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 SNF8Q96H20 258 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 EIF2AK1Q9BQI3 630 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 MRPL1Q9BYD6 325 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 TRIM9Q9C026 710 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 GRIP2Q9C0E4 1043 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 POLR3FQ9H1D9 316 aaPredicted RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 ARNT2Q9HBZ2 717 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 HHATLQ9HCP6 504 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 LYVE1Q9Y5Y7 322 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 ABCB11O95342 1321 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 KDM6AO15550 1401 aaPredicted RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 AGAP14A8MT82 685 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 NPC1O15118 1278 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 RNASEH2AO75792 299 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 POLBP06746 335 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PIK3CBP42338 1070 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 QARSP47897 775 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 NAGLUP54802 743 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 DIO3P55073 304 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 GPAT3Q53EU6 434 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 DCDC5Q6ZRR9 648 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 C19orf35Q6ZS72 473 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 TMEM179Q6ZVK1 233 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PRSS58Q8IYP2 241 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 C4orf33Q8N1A6 199 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 RIBC1Q8N443 379 aaPredicted RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 FAM71DQ8N9W8 422 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.36□□□□□ -1.715e-6■■■■■ 27.5
NCOA1-201ENST00000288599 ENKURQ8TC29 256 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 SSC4DQ8WTU2 575 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 ZNF570Q96NI8 536 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 HNRNPABQ99729 332 aaKnown RBP4.36□□□□□ -1.71
NCOA1-201ENST00000288599 MTMR12Q9C0I1 747 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 RNF112Q9ULX5 631 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 NUP188Q5SRE5 1749 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 LOC102723532A0A0G2JNH3 316 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 KLHL33A6NCF5 533 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 UBOX5O94941 541 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 MAP3K6O95382 1288 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 LATS1O95835 1130 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 PRKAR1AP10644 381 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 ZNF23P17027 643 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 ATP6V1B2P21281 511 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 MMP12P39900 470 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 SLC6A9P48067 706 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 CLCNKAP51800 687 aa4.36□□□□□ -1.71
NCOA1-201ENST00000288599 ROR1Q01973 937 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms