RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 NEUROG3Q9Y4Z2 214 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 APC2O95996 2303 aa9.09□□□□□ -0.95
HMGN1-201ENST00000288344 ANKRD11Q6UB99 2663 aaPredicted RBP9.09□□□□□ -0.95
HMGN1-201ENST00000288344 A6NCN8 305 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 MROH6A6NGR9 719 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ERVH48-1M5A8F1 160 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 CACNB4O00305 520 aaPredicted RBP9.08□□□□□ -0.96
HMGN1-201ENST00000288344 PDE2AO00408 941 aaPredicted RBP9.08□□□□□ -0.96
HMGN1-201ENST00000288344 SGTAO43765 313 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 HYAL3O43820 417 aaPredicted RBP9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ANXA9O76027 345 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 TNFP01375 233 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ATP1A1P05023 1023 aaKnown RBP9.08□□□□□ -0.96
HMGN1-201ENST00000288344 FGF1P05230 155 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 PYGLP06737 847 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 SPINK2P20155 84 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 HTR1BP28222 390 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 CXCR5P32302 372 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 RPL22P35268 128 aaKnown RBP9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ADCY8P40145 1251 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 GRIA1P42261 906 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 GPR1P46091 355 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 BLKP51451 505 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 GEMP55040 296 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 INSM1Q01101 510 aaPredicted RBP9.08□□□□□ -0.96
HMGN1-201ENST00000288344 FOXC1Q12948 553 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 SEMA5AQ13591 1074 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 DEFB133Q30KQ1 61 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 P3H1Q32P28 736 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ATP13A5Q4VNC0 1218 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 FAXCQ5TGI0 409 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 DENND2CQ68D51 928 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 PDPK2PQ6A1A2 396 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ITPRIPL1Q6GPH6 555 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ZCCHC8Q6NZY4 707 aaKnown RBP9.08□□□□□ -0.96
HMGN1-201ENST00000288344 TTC27Q6P3X3 843 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 HID1Q8IV36 788 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF547Q8IVP9 402 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 FSTL5Q8N475 847 aaPredicted RBP9.08□□□□□ -0.96
HMGN1-201ENST00000288344 TRAM1L1Q8N609 369 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 IPMKQ8NFU5 416 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 LMX1AQ8TE12 382 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 COG1Q8WTW3 980 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 PLEKHG4BQ96PX9 1271 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 VPS35Q96QK1 796 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ETNK1Q9HBU6 452 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 TRIM39Q9HCM9 518 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 PHPT1Q9NRX4 125 aaPredicted RBP9.08□□□□□ -0.96
HMGN1-201ENST00000288344 HACD3Q9P035 362 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 VPS18Q9P253 973 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 ATXN10Q9UBB4 475 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 KLQ9UEF7 1012 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 FTSJ1Q9UET6 329 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 KLK13Q9UKR3 277 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 SUFUQ9UMX1 484 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 TMEM98Q9Y2Y6 226 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 PLEKHM1Q9Y4G2 1056 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 KCTD3Q9Y597 815 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 NBEAQ8NFP9 2946 aa9.08□□□□□ -0.96
HMGN1-201ENST00000288344 GOLGA6L9A6NEM1 432 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 F5H423 210 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 H3BM21 787 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 H7C0S8 307 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 NTN3O00634 580 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 CES2O00748 559 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 NUAK1O60285 661 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 USP12O75317 370 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 AP2A1O95782 977 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 EML2O95834 649 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 FGGP02679 453 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 GP1BAP07359 652 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ZSCAN5DPP0CG00 497 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 CDK4P11802 303 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 KELP23276 732 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 MAGEA6P43360 314 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 KCNJ1P48048 391 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 CLCNKAP51800 687 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF140P52738 457 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 RAB15P59190 212 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 PRR20EP86478 221 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 PRR20CP86479 221 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 PRR20DP86480 221 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 PRR20BP86481 221 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 PRR20AP86496 221 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 CTBSQ01459 385 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 PEX6Q13608 980 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 SPARCL1Q14515 664 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 HLTFQ14527 1009 aaKnown RBP eCLIP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 NR1D2Q14995 579 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 TAF1AQ15573 450 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 INAVAQ3KP66 663 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF658BQ4V348 819 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 PAPD7Q5XG87 772 aaKnown RBP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 MICALCLQ6ZW33 695 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 VASH1Q7L8A9 365 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF438Q7Z4V0 828 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 ADGRG6Q86SQ4 1221 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 TRIM74Q86UV6 250 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 MARCH9Q86YJ5 346 aa9.07□□□□□ -0.96
HMGN1-201ENST00000288344 SLC35F6Q8N357 371 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms