RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 AGRPO00253 132 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 B4GAT1O43505 415 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 TNFSF15O95150 251 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 EML2O95834 649 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 FTCDO95954 541 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 PNLIPP16233 465 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 ZFP36L1Q07352 338 aaKnown RBP14.29□□□□□ -0.12
HMGN3-201ENST00000275036 KIF5AQ12840 1032 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 SLC1A5Q15758 541 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 CCDC181Q5TID7 509 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 PEX26Q7Z412 305 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 ZNF438Q7Z4V0 828 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 CLEC14AQ86T13 490 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 GALNT13Q8IUC8 556 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 ARL14Q8N4G2 192 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 TTC30BQ8N4P2 665 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 IPMKQ8NFU5 416 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 GBA3Q9H227 469 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 BPIFA1Q9NP55 256 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 THSD1Q9NS62 852 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 ATXN10Q9UBB4 475 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 RSPH14Q9UHP6 348 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 ZNHIT2Q9UHR6 403 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 TRHDEQ9UKU6 1024 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 TMPRSS11EQ9UL52 423 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 SSUH2Q9Y2M2 353 aa14.29□□□□□ -0.12
HMGN3-201ENST00000275036 PPM1DO15297 605 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 EPOP01588 193 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 RBP3P10745 1247 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 CCKBRP32239 447 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 UGT1A5P35504 534 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 INHBCP55103 352 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 OR1D5P58170 312 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 EIF3EP60228 445 aaKnown RBP14.28□□□□□ -0.12
HMGN3-201ENST00000275036 MPP3Q13368 585 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 OLIG2Q13516 323 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 COL9A2Q14055 689 aaPredicted RBP14.28□□□□□ -0.12
HMGN3-201ENST00000275036 NR1D2Q14995 579 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 KHDC1Q4VXA5 237 aaKnown RBP14.28□□□□□ -0.12
HMGN3-201ENST00000275036 ZNF569Q5MCW4 686 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 CCDC70Q6NSX1 233 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 PCSK4Q6UW60 755 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 CDKL3Q8IVW4 592 aaPredicted RBP14.28□□□□□ -0.12
HMGN3-201ENST00000275036 SLITRK4Q8IW52 837 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 TRAM1L1Q8N609 369 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 KCNE4Q8WWG9 221 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 ZSCAN5AQ9BUG6 496 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 SEMA6CQ9H3T2 930 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 RDH14Q9HBH5 336 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 CPNE5Q9HCH3 593 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 ADGRG1Q9Y653 693 aa14.28□□□□□ -0.12
HMGN3-201ENST00000275036 TCRBV7S2A1N4TA0A589 114 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 PLD2O14939 933 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 KCNN4O15554 427 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 NUAK1O60285 661 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 AGTP01019 485 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 ITGA2BP08514 1039 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 ZNF8P17098 575 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-201ENST00000275036 ITIH1P19827 911 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 PSMB4P28070 264 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 RBMS1P29558 406 aaKnown RBP14.27□□□□□ -0.13
HMGN3-201ENST00000275036 CA5AP35218 305 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 HMGCLP35914 325 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 CXADRP78310 365 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 KLF1Q13351 362 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-201ENST00000275036 LRP8Q14114 963 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 ANKRD20A2Q5SQ80 823 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 ANKRD20A1Q5TYW2 823 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 ANKRD20A3Q5VUR7 823 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 ZNF574Q6ZN55 896 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-201ENST00000275036 RAB11FIP2Q7L804 512 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 CHST15Q7LFX5 561 aaPredicted RBP14.27□□□□□ -0.13
HMGN3-201ENST00000275036 ADGRG6Q86SQ4 1221 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 CCDC110Q8TBZ0 833 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 GLYATL1Q969I3 302 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 HES6Q96HZ4 224 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 NUDT22Q9BRQ3 303 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 OR2AG1Q9H205 316 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 CARD9Q9H257 536 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 IL17CQ9P0M4 197 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 TBC1D29Q9UFV1 150 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 KCNK6Q9Y257 313 aa14.27□□□□□ -0.13
HMGN3-201ENST00000275036 R3HDM2Q9Y2K5 976 aaKnown RBP14.27□□□□□ -0.13
HMGN3-201ENST00000275036 PIKFYVEQ9Y2I7 2098 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 TRBV23OR9-2A0A075B6M9 112 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 A6NCN8 305 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 MIF4GDA9UHW6 222 aaKnown RBP14.26□□□□□ -0.13
HMGN3-201ENST00000275036 GPR39O43194 453 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 KLK10O43240 276 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 GRID2O43424 1007 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 BUD23O43709 281 aaKnown RBP14.26□□□□□ -0.13
HMGN3-201ENST00000275036 MTX2O75431 263 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 TJP3O95049 919 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 SLC25A14O95258 325 aaPredicted RBP14.26□□□□□ -0.13
HMGN3-201ENST00000275036 ACP5P13686 325 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 HLA-DPA1P20036 260 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 ADRA1AP35348 466 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 ETV5P41161 510 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 CFHR1Q03591 330 aa14.26□□□□□ -0.13
HMGN3-201ENST00000275036 CLN3Q13286 438 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms