RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PDZD8Q8NEN9 1154 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 ADCY4Q8NFM4 1077 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 STAG3L4Q8TBR4 150 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 TUBGCP3Q96CW5 907 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 SLC45A3Q96JT2 553 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 TUBB1Q9H4B7 451 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 CXXC1Q9P0U4 656 aaPredicted RBP12.82□□□□□ -0.36
CPSF6-201ENST00000266679 POLG2Q9UHN1 485 aa12.82□□□□□ -0.36
CPSF6-201ENST00000266679 BTN3A1O00481 513 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 HOXA2O43364 376 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 OR1I1O60431 355 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 SNAP91O60641 907 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 NIPSNAP2O75323 286 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 LPOP22079 712 aaPredicted RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 ECT2LQ008S8 904 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TRAF2Q12933 501 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 PPIGQ13427 754 aaKnown RBP eCLIP12.81□□□□□ -0.367e-10■□□□□ 9.9
CPSF6-201ENST00000266679 ZRANB3Q5FWF4 1079 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 RETREG3Q86VR2 466 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TICAM1Q8IUC6 712 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TMEM126BQ8IUX1 230 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 PIANPQ8IYJ0 282 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TMEM199Q8N511 208 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 FAM192AQ9GZU8 254 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 SEMA6AQ9H2E6 1030 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 Q9H521 79 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 SMPD4Q9NXE4 827 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TRPM5Q9NZQ8 1165 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TMEM181Q9P2C4 612 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 MTRRQ9UBK8 725 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 AP4B1Q9Y6B7 739 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 ANKRD12Q6UB98 2062 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 ANAPC1Q9H1A4 1944 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 A0A1B0GVM2 712 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 LCHNA4D1U4 455 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 C2orf78A6NCI8 922 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TMCC1O94876 653 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 F11P03951 625 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 FGF4P08620 206 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 PIM1P11309 404 aaPredicted RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 HMGA1P17096 107 aaKnown RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 GRIA2P42262 883 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TUFMP49411 452 aaKnown RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 ACADVLP49748 655 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 AGTR2P50052 363 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 ATP6V0D1P61421 351 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 ARF5P84085 180 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 LCP2Q13094 533 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 GRM2Q14416 872 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 MAP7D1Q3KQU3 841 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 SAMD4BQ5PRF9 694 aaKnown RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 C6orf10Q5SRN2 563 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 C8orf82Q6P1X6 216 aaPredicted RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 CHST9Q7L1S5 443 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 OTOP2Q7RTS6 562 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 PHYKPLQ8IUZ5 450 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 LRRC43Q8N309 656 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 MIER2Q8N344 545 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 MYLIPQ8WY64 445 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 CNBD2Q96M20 576 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 CENPKQ9BS16 269 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 VN1R3Q9BXE9 311 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 RNF38Q9H0F5 515 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 CD300AQ9UGN4 299 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TRMT6Q9UJA5 497 aaKnown RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TSR3Q9UJK0 312 aaKnown RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 ARIH1Q9Y4X5 557 aaPredicted RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 TIMM22Q9Y584 194 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 OAS3Q9Y6K5 1087 aaKnown RBP12.81□□□□□ -0.36
CPSF6-201ENST00000266679 PTPRSQ13332 1948 aa12.81□□□□□ -0.36
CPSF6-201ENST00000266679 EME2A4GXA9 379 aaPredicted RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 GPR39O43194 453 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 VPS26AO75436 327 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 PYGLP06737 847 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 RPS17P08708 135 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 PKMP14618 531 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 CAPN3P20807 821 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 SMAD3P84022 425 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 CDKL1Q00532 357 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 RBBP7Q16576 425 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 VPS26BQ4G0F5 336 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 CTSL3PQ5NE16 218 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 C6orf52Q5T4I8 152 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 ANKS6Q68DC2 871 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 SLC8B1Q6J4K2 584 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 CXorf57Q6NSI4 855 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 HACD2Q6Y1H2 254 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 CARNMT1Q8N4J0 409 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 MARVELD2Q8N4S9 558 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 LRTOMTQ8WZ04 291 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 OVCA2Q8WZ82 227 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 TOP1MTQ969P6 601 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 FUBP1Q96AE4 644 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 VWCEQ96DN2 955 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 LINGO1Q96FE5 620 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 BIRC8Q96P09 236 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 CDX2Q99626 313 aaPredicted RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 SARS2Q9NP81 518 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 RAB26Q9ULW5 256 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 PCDHGB4Q9UN71 923 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms