RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 MAGEA6P43360 314 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 SLC11A1P49279 550 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 RPS6KA3P51812 740 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 DIO3P55073 304 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 ACAP2Q15057 778 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 CRY1Q16526 586 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 KIAA0930Q6ICG6 404 aaPredicted RBP19.71■□□□□ 0.75
CSPG5-201ENST00000264723 PAQR9Q6ZVX9 377 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 ANKRD49Q8WVL7 239 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 OSGEPL1Q9H4B0 414 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 GALPQ9UBC7 116 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 EIF2B4Q9UI10 523 aaKnown RBP19.71■□□□□ 0.75
CSPG5-201ENST00000264723 CNOT6Q9ULM6 557 aaKnown RBP19.71■□□□□ 0.75
CSPG5-201ENST00000264723 DMTF1Q9Y222 760 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 CPQQ9Y646 472 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 C17orf99Q6UX52 265 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 DDHD1Q8NEL9 900 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 ZMIZ2Q8NF64 920 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 BPIFB6Q8NFQ5 453 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 ASAH2Q9NR71 780 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 COL24A1Q17RW2 1714 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 CEP290O15078 2479 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 EI24O14681 340 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 LRATO95237 230 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 TTPAP49638 278 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 MAPK11Q15759 364 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 KIAA0319Q5VV43 1072 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 PLPP4Q5VZY2 271 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 FBXL19Q6PCT2 694 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 AFTPHQ6ULP2 937 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 SYTL1Q8IYJ3 562 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 FAM81AQ8TBF8 368 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 ZIC5Q96T25 663 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 OPTCQ9UBM4 332 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 FKBPLQ9UIM3 349 aa19.71■□□□□ 0.75
CSPG5-201ENST00000264723 UTRNP46939 3433 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 NPHS1O60500 1241 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 SNAP91O60641 907 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 SLC22A3O75751 556 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 MTPNP58546 118 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 CPNE9Q8IYJ1 553 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 FUBP3Q96I24 572 aaKnown RBP eCLIP19.7■□□□□ 0.74
CSPG5-201ENST00000264723 GNG14A0A1W2PPG7 69 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 IQCF5A8MTL0 148 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 DEAF1O75398 565 aaPredicted RBP19.7■□□□□ 0.74
CSPG5-201ENST00000264723 BCAS2O75934 225 aaPredicted RBP19.7■□□□□ 0.74
CSPG5-201ENST00000264723 FAM98BQ52LJ0 330 aaKnown RBP19.7■□□□□ 0.74
CSPG5-201ENST00000264723 SIRPB2Q5JXA9 342 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 TRMT11Q7Z4G4 463 aaKnown RBP19.7■□□□□ 0.74
CSPG5-201ENST00000264723 ZDHHC13Q8IUH4 622 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 TMCO5AQ8N6Q1 288 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 OR10Q1Q8NGQ4 319 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 KLHL32Q96NJ5 620 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 SLC2A13Q96QE2 648 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 IGFLR1Q9H665 355 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 PREBQ9HCU5 417 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 PRORSD1PA6NEY8 169 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 CDC7O00311 574 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 STK25O00506 426 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 UGT2B4P06133 528 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 PAX3P23760 479 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 SKIV2LQ15477 1246 aaKnown RBP19.7■□□□□ 0.74
CSPG5-201ENST00000264723 TXNDC8Q6A555 127 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 GPRIN3Q6ZVF9 776 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 PGBD3Q8N328 593 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 KDM1BQ8NB78 822 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 ASB9Q96DX5 294 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 FAM120BQ96EK7 910 aaKnown RBP19.7■□□□□ 0.74
CSPG5-201ENST00000264723 OSBPL2Q9H1P3 480 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 SPG21Q9NZD8 308 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 ATXN10Q9UBB4 475 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 ZNF229Q9UJW7 825 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 TLR6Q9Y2C9 796 aa19.7■□□□□ 0.74
CSPG5-201ENST00000264723 NIPSNAP2O75323 286 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 RPP40O75818 363 aaKnown RBP19.69■□□□□ 0.74
CSPG5-201ENST00000264723 IL1BP01584 269 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 GABRB3P28472 473 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 SOAT1P35610 550 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 MAGEA3P43357 314 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 GRB7Q14451 532 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 ACOX1Q15067 660 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 MYLK3Q32MK0 819 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 CST9Q5W186 159 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 NKAPQ8N5F7 415 aaKnown RBP19.69■□□□□ 0.74
CSPG5-201ENST00000264723 SIDT2Q8NBJ9 832 aaKnown RBP19.69■□□□□ 0.74
CSPG5-201ENST00000264723 ACTL7AQ9Y615 435 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 C16orf96A6NNT2 1141 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 ARVCFO00192 962 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 MSH3P20585 1137 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 CTNNB1P35222 781 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 NUP107P57740 925 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 CDKL1Q00532 357 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 PRKG2Q13237 762 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 ZNF423Q2M1K9 1284 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 HJURPQ8NCD3 748 aaPredicted RBP19.69■□□□□ 0.74
CSPG5-201ENST00000264723 PLEKHG4BQ96PX9 1271 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 EMILIN2Q9BXX0 1053 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 SLC13A4Q9UKG4 626 aa19.69■□□□□ 0.74
CSPG5-201ENST00000264723 POLR3HQ9Y535 204 aaPredicted RBP19.69■□□□□ 0.74
CSPG5-201ENST00000264723 TRAV19A0A0A6YYK7 116 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms