RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PQLC1Q8N2U9 271 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 BPIFB6Q8NFQ5 453 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 REXO5Q96IC2 774 aaKnown RBP13.91□□□□□ -0.18
CDH3-201ENST00000264012 PPM1MQ96MI6 270 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 LENG8Q96PV6 779 aaPredicted RBP13.91□□□□□ -0.18
CDH3-201ENST00000264012 ATG10Q9H0Y0 220 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 DYTNA2CJ06 578 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 ITGA2P17301 1181 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 PSMA3P25788 255 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 NAE1Q13564 534 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 KRR1Q13601 381 aaKnown RBP13.91□□□□□ -0.18
CDH3-201ENST00000264012 TPGS2Q68CL5 300 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 FBXL22Q6P050 247 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 TMPRSS11BQ86T26 416 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 TSPAN14Q8NG11 270 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 SPATA5L1Q9BVQ7 753 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 CD84Q9UIB8 345 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 MAGEL2Q9UJ55 1249 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 RGPD2P0DJD1 1756 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 URADA6NGE7 173 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 SNAP91O60641 907 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 GNRH1P01148 92 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 UMPSP11172 480 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 PTGER3P43115 390 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 INAQ16352 499 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 EIF3MQ7L2H7 374 aaKnown RBP13.91□□□□□ -0.18
CDH3-201ENST00000264012 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDH3-201ENST00000264012 CPNE9Q8IYJ1 553 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 GLIS1Q8NBF1 620 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 FEM1CQ96JP0 617 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 SAMHD1Q9Y3Z3 626 aaKnown RBP13.91□□□□□ -0.18
CDH3-201ENST00000264012 GMPPBQ9Y5P6 360 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 IQCF5A8MTL0 148 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 HLA-DQB2P05538 268 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 PPIBP23284 216 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 POLR2JP52435 117 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 CDC42P60953 191 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 CYP4F8P98187 520 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 RALGDSQ12967 914 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 TAF1AQ15573 450 aaPredicted RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 ARMCX4Q5H9R4 360 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 ABRAXAS1Q6UWZ7 409 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 C16orf62Q7Z3J2 963 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 ZCCHC7Q8N3Z6 543 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 HEPHQ9BQS7 1158 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 GSAPA4D1B5 854 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 UBXN8O00124 270 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 RGS20O76081 388 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 KELP23276 732 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 FOXN2P32314 431 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 TALDO1P37837 337 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 FEN1P39748 380 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 PSMD8P48556 350 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 WDR4P57081 412 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 RGS1Q08116 209 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 LSM12Q3MHD2 195 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 PLA2G4EQ3MJ16 856 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 FAM182AQ5T1J6 154 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 CPTPQ5TA50 214 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 PROSER1Q86XN7 944 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 OR8H2Q8N162 312 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 PHF10Q8WUB8 498 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 RNFT2Q96EX2 444 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 SPACA7Q96KW9 195 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 OSBPL7Q9BZF2 842 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 GKN1Q9NS71 199 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 CDH22Q9UJ99 828 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 PSMD13Q9UNM6 376 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 TSC22D4Q9Y3Q8 395 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 A8MUI8 341 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 GABRDO14764 452 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 NDUFB5O43674 189 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 CLDN9O95484 217 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 TRBC1P01850 177 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 IFNA16P05015 189 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 TCF3P15923 654 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 ZNHIT3Q15649 155 aaPredicted RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 VPS26BQ4G0F5 336 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 GPAT3Q53EU6 434 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 IL23RQ5VWK5 629 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 ZNF544Q6NX49 715 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 CHSY3Q70JA7 882 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 DNAJB7Q7Z6W7 309 aaPredicted RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 RERGQ96A58 199 aaPredicted RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 C6orf62Q9GZU0 229 aaPredicted RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 PAIP1Q9H074 479 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 MIR1-1HGQ9H1L0 117 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 DUS2Q9NX74 493 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 AP4B1Q9Y6B7 739 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 TRIM24O15164 1050 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 PGM3O95394 542 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 ACRP10323 421 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 KIR3DL1P43629 444 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 SLC10A7Q0GE19 358 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 DGKKQ5KSL6 1271 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 PHYKPLQ8IUZ5 450 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 CNTD1Q8N815 330 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 OR10G6Q8NH81 332 aa13.9□□□□□ -0.18
CDH3-201ENST00000264012 WRAP53Q9BUR4 548 aaKnown RBP13.9□□□□□ -0.18
CDH3-201ENST00000264012 OSBPL11Q9BXB4 747 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms