RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 GIPC2Q8TF65 315 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 RORBQ92753 470 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 CCDC97Q96F63 343 aaPredicted RBP12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 CELF6Q96J87 481 aaKnown RBP12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 TPK1Q9H3S4 243 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 EHD1Q9H4M9 534 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 SACM1LQ9NTJ5 587 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 ZIM2Q9NZV7 527 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 ZNF229Q9UJW7 825 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 PCDHGA8Q9Y5G5 932 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 NRCAMQ92823 1304 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 FAM234BA2RU67 622 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 UPK1AO00322 258 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 AURKAO14965 403 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 WISP3O95389 354 aaPredicted RBP12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 CHRNA1P02708 482 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 FYNP06241 537 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 LINC00032P0C843 101 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 IL7RP16871 459 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 BDNFP23560 247 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 HRH2P25021 359 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 HTR7P34969 479 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 MTHFRP42898 656 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 CXCR3P49682 368 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 DAOAP59103 153 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 SELENBP1Q13228 472 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 HIST2H2ACQ16777 129 aaPredicted RBP12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 IMPG1Q17R60 797 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 PGS1Q32NB8 556 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 RFX4Q33E94 735 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 PAGE2BQ5JRK9 111 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 HFE2Q6ZVN8 426 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 BTLAQ7Z6A9 289 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 AKAP14Q86UN6 197 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 CILP2Q8IUL8 1156 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 PJA1Q8NG27 643 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 TRIB2Q92519 343 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 POP5Q969H6 163 aaKnown RBP12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 ULBP1Q9BZM6 244 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 TKTL2Q9H0I9 626 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 ARNT2Q9HBZ2 717 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 C3orf18Q9UK00 162 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
CHMP2B-201ENST00000263780 SYCE1LA8MT33 242 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 H3BMM5 538 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 IFRD1O00458 451 aaPredicted RBP12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 PMPCBO75439 489 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 MT-ND1P03886 318 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 TXNP10599 105 aaKnown RBP12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 CD40LGP29965 261 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 NEK2P51955 445 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 PPP5CP53041 499 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 TPTEP56180 551 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 LCP2Q13094 533 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 LRRC49Q8IUZ0 686 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 TOP6BLQ8N6T0 577 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 ATP6V0D2Q8N8Y2 350 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 GLMNQ92990 594 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 VPS33AQ96AX1 596 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 TXNDC15Q96J42 360 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 BRINP2Q9C0B6 783 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 SPATC1LQ9H0A9 340 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 POPDC3Q9HBV1 291 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 ORC6Q9Y5N6 252 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 CITO14578 2027 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 SAGE2PA6NJ88 616 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 C9JVG2 144 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 NUAK1O60285 661 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 RPS12P25398 132 aaKnown RBP12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 RYKP34925 604 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 CASP2P42575 452 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 GP2P55259 537 aaKnown RBP12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 DNASE1L3Q13609 305 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 TTLL4Q14679 1199 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 MEP1AQ16819 746 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 PAGE3Q5JUK9 113 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 TUBA3EQ6PEY2 450 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 CLEC20AQ6ZU45 233 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 BEND5Q7L4P6 421 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 SLC22A16Q86VW1 577 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 KIAA2013Q8IYS2 634 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 DPP10Q8N608 796 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 OR13J1Q8NGT2 312 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 RNF34Q969K3 372 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 ZNF566Q969W8 418 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 DACH2Q96NX9 599 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 YME1L1Q96TA2 773 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 OSBPL10Q9BXB5 764 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 ASPSCR1Q9BZE9 553 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 CCDC90BQ9GZT6 254 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 MFSD1Q9H3U5 465 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 TFB2MQ9H5Q4 396 aaKnown RBP12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 EPS8L2Q9H6S3 715 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 SPON1Q9HCB6 807 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 FZD1Q9UP38 647 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 V9GYQ6 96 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 SCN1AP35498 2009 aa12.3□□□□□ -0.44
CHMP2B-201ENST00000263780 SLC1A7O00341 560 aa12.29□□□□□ -0.44
CHMP2B-201ENST00000263780 SNX2O60749 519 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms