RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 COPS5Q92905 334 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 NACC2Q96BF6 587 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 FSD1LQ9BXM9 530 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 ERVK-6Q9BXR3 956 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 HOXD1Q9GZZ0 328 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 ATXN3LQ9H3M9 355 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 SLC52A3Q9NQ40 469 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 TREX1Q9NSU2 369 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 RABL2BQ9UNT1 228 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 USP22Q9UPT9 525 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 MAGED1Q9Y5V3 778 aaPredicted RBP14.89□□□□□ -0.03
XRCC1-201ENST00000262887 A0A1W2PP18 115 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 ZNF99A8MXY4 864 aaPredicted RBP14.89□□□□□ -0.03
XRCC1-201ENST00000262887 UPK1AO00322 258 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 CLDN5O00501 218 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 PPP6CO00743 305 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 AZIN1O14977 448 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 AXIN1O15169 862 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 NUAK1O60285 661 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 BEST1O76090 585 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 GABARAPO95166 117 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 INSRRP14616 1297 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
XRCC1-201ENST00000262887 FOXA1P55317 472 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 ADAM17P78536 824 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 FBXO47Q5MNV8 452 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 HECTD2Q5U5R9 776 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 C9orf57Q5W0N0 161 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 DCAF15Q66K64 600 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 FAAH2Q6GMR7 532 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 NEK10Q6ZWH5 1172 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 PNPLA1Q8N8W4 532 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 NODALQ96S42 347 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 SPC25Q9HBM1 224 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 MOV10Q9HCE1 1003 aaKnown RBP14.89□□□□□ -0.03
XRCC1-201ENST00000262887 CPNE5Q9HCH3 593 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 FAM118AQ9NWS6 357 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 FBXW11Q9UKB1 542 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
XRCC1-201ENST00000262887 DFFAO00273 331 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CDK14O94921 469 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 NTRK1P04629 796 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CDH1P12830 882 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CES1P23141 567 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 HRH2P25021 359 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CHRNA4P43681 627 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CDC20Q12834 499 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 TOP3AQ13472 1001 aaPredicted RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 FSCN1Q16658 493 aaKnown RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 HIST2H2ACQ16777 129 aaPredicted RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 FNDC1Q4ZHG4 1894 aaPredicted RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 Q8N9G6 341 aaPredicted RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 ZNF555Q8NEP9 628 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 DPF3Q92784 378 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 GLMNQ92990 594 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 TXNDC15Q96J42 360 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 NSMCE2Q96MF7 247 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 KCNA7Q96RP8 456 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 BCL7BQ9BQE9 202 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 DUSP16Q9BY84 665 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CCDC90BQ9GZT6 254 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 DDIT4Q9NX09 232 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 POLG2Q9UHN1 485 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 BTRCQ9Y297 605 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 NRCAMQ92823 1304 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CACNG3O60359 315 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 PMPCBO75439 489 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CHEK2O96017 543 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 LINC00032P0C843 101 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 PCMT1P22061 227 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 DIO3P55073 304 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CTU2Q2VPK5 515 aaKnown RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 PAGE3Q5JUK9 113 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 BPHLQ86WA6 291 aaPredicted RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 OR12D3Q9UGF7 316 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 DERAQ9Y315 318 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 DNAH12Q6ZR08 3092 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 PTGES3LE9PB15 166 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 SIX3O95343 332 aaPredicted RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 KRT75O95678 551 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 HPRP00739 348 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 PCNAP12004 261 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 NPR3P17342 541 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 AGXTP21549 392 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 HTR1EP28566 365 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 NKX2-5P52952 324 aaPredicted RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 CARTPTQ16568 116 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 ADPRMQ3LIE5 342 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 ARHGAP36Q6ZRI8 547 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 ISCA2Q86U28 154 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 KLHDC8BQ8IXV7 354 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 KIAA2013Q8IYS2 634 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 SDCCAG3Q96C92 435 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 ZNF486Q96H40 463 aaPredicted RBP14.88□□□□□ -0.03
XRCC1-201ENST00000262887 TNIP3Q96KP6 325 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 RDH12Q96NR8 316 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 FCRL5Q96RD9 977 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 SP140LQ9H930 580 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 LTB4R2Q9NPC1 389 aa14.88□□□□□ -0.03
XRCC1-201ENST00000262887 NECTIN3Q9NQS3 549 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms