RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-201ENST00000261646 EFCAB9A8MZ26 197 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-201ENST00000261646 MYL12BO14950 172 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 SLC22A1O15245 554 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 UGT2B11O75310 529 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 PIGRP01833 764 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 CD36P16671 472 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 ITGALP20701 1170 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 PCSK6P29122 969 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 GLUD2P49448 558 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 ZNF177Q13360 481 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-201ENST00000261646 PRAMEF19Q5SWL8 479 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 SFMBT1Q9UHJ3 866 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 VPS51Q9UID3 782 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 FZD10Q9ULW2 581 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 HTR3EA5X5Y0 456 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 FGF10O15520 208 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-201ENST00000261646 SPATA31D3P0C874 917 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 CHI3L1P36222 383 aaPredicted RBP16.12■□□□□ 0.17
SREBF1-201ENST00000261646 RABGGTBP53611 331 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 PIGFQ07326 219 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 SPATA31D4Q6ZUB0 917 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 PIK3C3Q8NEB9 887 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 TRPV5Q9NQA5 729 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 TLL2Q9Y6L7 1015 aa16.12■□□□□ 0.17
SREBF1-201ENST00000261646 GABBR2O75899 941 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 HOXD12P35452 270 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 TALDO1P37837 337 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 BMXP51813 675 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 ATP6V0D1P61421 351 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 PHKG1Q16816 387 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 TTC23LQ6PF05 361 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 CASP12Q6UXS9 341 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 STYXQ8WUJ0 223 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 SH3KBP1Q96B97 665 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 TSSK3Q96PN8 268 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 CLEC4MQ9H2X3 399 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-201ENST00000261646 GDAP2Q9NXN4 497 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 RPS6KA6Q9UK32 745 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 IRS2Q9Y4H2 1338 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 AREL1O15033 823 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 ABCB7O75027 752 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 CDH5P33151 784 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-201ENST00000261646 CD97P48960 835 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 NFATC3Q12968 1075 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 NPTX1Q15818 432 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 TYSND1Q2T9J0 566 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 GNASQ5JWF2 1037 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 PGM2L1Q6PCE3 622 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 SYT12Q8IV01 421 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 MINDY2Q8NBR6 621 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 TXNDC5Q8NBS9 432 aaKnown RBP16.11■□□□□ 0.17
SREBF1-201ENST00000261646 OR4L1Q8NH43 312 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 LINGO1Q96FE5 620 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 TDRD1Q9BXT4 1180 aaKnown RBP16.11■□□□□ 0.17
SREBF1-201ENST00000261646 NOTOA8MTQ0 251 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 AURKAO14965 403 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 AQP1P29972 269 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 OR1G1P47890 313 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 SULT2A1Q06520 285 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 GALNT3Q14435 633 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 SKIV2LQ15477 1246 aaKnown RBP16.11■□□□□ 0.17
SREBF1-201ENST00000261646 CRY1Q16526 586 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 SYTL3Q4VX76 610 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 PLEKHM3Q6ZWE6 761 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 UBE2J2Q8N2K1 259 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 TRUB1Q8WWH5 349 aaKnown RBP16.11■□□□□ 0.17
SREBF1-201ENST00000261646 FCRL3Q96P31 734 aaPredicted RBP16.11■□□□□ 0.17
SREBF1-201ENST00000261646 VPS35Q96QK1 796 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 ZNF347Q96SE7 839 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 HEPHQ9BQS7 1158 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 LRRC3Q9BY71 257 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 ITM2CQ9NQX7 267 aa16.11■□□□□ 0.17
SREBF1-201ENST00000261646 MYH14Q7Z406 1995 aaKnown RBP16.1■□□□□ 0.17
SREBF1-201ENST00000261646 KLRG2A4D1S0 409 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-201ENST00000261646 RFXANKO14593 260 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 LMO2P25791 158 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 ICAM3P32942 547 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 INHBCP55103 352 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 RFTN1Q14699 578 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-201ENST00000261646 PYDC2Q56P42 97 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 RBM48Q5RL73 367 aaKnown RBP16.1■□□□□ 0.17
SREBF1-201ENST00000261646 OVOS1Q6IE37 1185 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 PLET1Q6UQ28 207 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 DET1Q7L5Y6 550 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 KLRG1Q96E93 195 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 RNFT2Q96EX2 444 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 SORT1Q99523 831 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 RNF38Q9H0F5 515 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 BPIFA1Q9NP55 256 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 OR4F21O95013 312 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 POMCP01189 267 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 TSPAN19P0C672 248 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 ZNF7P17097 686 aaPredicted RBP16.1■□□□□ 0.17
SREBF1-201ENST00000261646 CYP2C18P33260 490 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 ZNF132P52740 706 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 SLC16A1P53985 500 aa16.1■□□□□ 0.17
SREBF1-201ENST00000261646 RBM20Q5T481 1227 aaKnown RBP16.1■□□□□ 0.17
SREBF1-201ENST00000261646 ZNF280DQ6N043 979 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms