RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ENTPD2Q9Y5L3 495 aa22.73■■□□□ 1.23
LSM4-201ENST00000252816 A0A1W2PNU3 283 aaPredicted RBP22.72■■□□□ 1.23
LSM4-201ENST00000252816 NUDT21O43809 227 aaKnown RBP22.72■■□□□ 1.23
LSM4-201ENST00000252816 NUAK1O60285 661 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 RPLP0P05388 317 aaKnown RBP22.72■■□□□ 1.23
LSM4-201ENST00000252816 GDF10P55107 478 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 LRP8Q14114 963 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 PRPSAP1Q14558 356 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 KHDC1Q4VXA5 237 aaKnown RBP22.72■■□□□ 1.23
LSM4-201ENST00000252816 MEI1Q5TIA1 1274 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 GLT6D1Q7Z4J2 308 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 ADGRG6Q86SQ4 1221 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 KLHDC8BQ8IXV7 354 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 ARL14Q8N4G2 192 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 ATG4AQ8WYN0 398 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 ATXN7L3BQ96GX2 97 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 TMEM121Q9BTD3 319 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 CARD9Q9H257 536 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 LRRN3Q9H3W5 708 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 RMI1Q9H9A7 625 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 TRIM39Q9HCM9 518 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 IL26Q9NPH9 171 aa22.72■■□□□ 1.23
LSM4-201ENST00000252816 BRINP1O60477 761 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 MTX2O75431 263 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 ZNF189O75820 626 aaPredicted RBP22.71■■□□□ 1.23
LSM4-201ENST00000252816 EML2O95834 649 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 MPOP05164 745 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 PNLIPP16233 465 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 PTPRCAPQ14761 206 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 ATP13A5Q4VNC0 1218 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 SEL1L2Q5TEA6 688 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 CHST15Q7LFX5 561 aaPredicted RBP22.71■■□□□ 1.23
LSM4-201ENST00000252816 SPRED1Q7Z699 444 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 UBE2Q2Q8WVN8 375 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 GRPEL1Q9HAV7 217 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 ARL5AQ9Y689 179 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 BPTFQ12830 3046 aa22.71■■□□□ 1.23
LSM4-201ENST00000252816 URB1O60287 2271 aaKnown RBP22.7■■□□□ 1.22
LSM4-201ENST00000252816 D6RAR5 112 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 GRID2O43424 1007 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 METTL18O95568 372 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 ACP5P13686 325 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 MSLNQ13421 630 aaPredicted RBP22.7■■□□□ 1.22
LSM4-201ENST00000252816 PEX6Q13608 980 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 SPARCL1Q14515 664 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 RPS6KA1Q15418 735 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 CHRNA6Q15825 494 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 DENND5AQ6IQ26 1287 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 ARHGEF18Q6ZSZ5 1173 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 ZNF438Q7Z4V0 828 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 B3GNT8Q7Z7M8 397 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 SLC13A5Q86YT5 568 aaPredicted RBP22.7■■□□□ 1.22
LSM4-201ENST00000252816 PHYKPLQ8IUZ5 450 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 VPS35Q96QK1 796 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 GFM1Q96RP9 751 aaKnown RBP22.7■■□□□ 1.22
LSM4-201ENST00000252816 KCNK6Q9Y257 313 aa22.7■■□□□ 1.22
LSM4-201ENST00000252816 ZFHX4Q86UP3 3567 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 GAPDHSO14556 408 aaPredicted RBP22.69■■□□□ 1.22
LSM4-201ENST00000252816 GPR39O43194 453 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 B4GAT1O43505 415 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 TLX3O43711 291 aaPredicted RBP22.69■■□□□ 1.22
LSM4-201ENST00000252816 CA5AP35218 305 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 SPAM1P38567 509 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 GABREP78334 506 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 B4GALNT1Q00973 533 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 PARP6Q2NL67 630 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 KCTD11Q693B1 232 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 FAM151BQ6UXP7 276 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 GRAMD1AQ96CP6 724 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 TBL1YQ9BQ87 522 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 TBC1D29Q9UFV1 150 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 ATXN7L1Q9ULK2 861 aaPredicted RBP22.69■■□□□ 1.22
LSM4-201ENST00000252816 PPP2R2CQ9Y2T4 447 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 PKP3Q9Y446 797 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 KCTD3Q9Y597 815 aa22.69■■□□□ 1.22
LSM4-201ENST00000252816 UNC13CQ8NB66 2214 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 TRBV23OR9-2A0A075B6M9 112 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 PMS2P1A4D2B8 440 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 RHPN2P1A8MT19 583 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 CHUKO15111 745 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 PPM1DO15297 605 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 UGT1A9O60656 530 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 UGT1A6P19224 532 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 UGT1A1P22309 533 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 UGT1A4P22310 534 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 UGT1A3P35503 534 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 UGT1A5P35504 534 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 LSSP48449 732 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 OR1D5P58170 312 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 NR1D2Q14995 579 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 OASLQ15646 514 aaKnown RBP22.68■■□□□ 1.22
LSM4-201ENST00000252816 ZDHHC20Q5W0Z9 365 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 CRTC3Q6UUV7 619 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 DTX3LQ8TDB6 740 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 PPP1R2P1Q96PQ5 205 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 ALS2CR12Q96Q35 445 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 FOXP3Q9BZS1 431 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 POLR1BQ9H9Y6 1135 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 UGT1A7Q9HAW7 530 aa22.68■■□□□ 1.22
LSM4-201ENST00000252816 UGT1A10Q9HAW8 530 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms