RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 BRD8Q9H0E9 1235 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 RAD18Q9NS91 495 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 TMEM9Q9P0T7 183 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 TBC1D29Q9UFV1 150 aa20.85■□□□□ 0.93
NEDD8-201ENST00000250495 PCYT1BQ9Y5K3 369 aaPredicted RBP20.85■□□□□ 0.93
NEDD8-201ENST00000250495 PPP1R12AO14974 1030 aaPredicted RBP20.84■□□□□ 0.93
NEDD8-201ENST00000250495 GRID2O43424 1007 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 SFTPCP11686 197 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 ACP5P13686 325 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 RAB15P59190 212 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 GALNT3Q14435 633 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 DCAF12Q5T6F0 453 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 AVL9Q8NBF6 648 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 JPH3Q8WXH2 748 aaPredicted RBP20.84■□□□□ 0.93
NEDD8-201ENST00000250495 NKD1Q969G9 470 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 IMP4Q96G21 291 aaKnown RBP20.84■□□□□ 0.93
NEDD8-201ENST00000250495 CCDC42Q96M95 316 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 SPATA16Q9BXB7 569 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 SLC25A51Q9H1U9 297 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 MAGEE1Q9HCI5 957 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 KCNK6Q9Y257 313 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 B3GALT1Q9Y5Z6 326 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 SDK2Q58EX2 2172 aa20.84■□□□□ 0.93
NEDD8-201ENST00000250495 KIR2DS5A0A0G2JLQ3 304 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 A0A0G2JNG1 304 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 C3orf70A6NLC5 250 aaPredicted RBP20.83■□□□□ 0.93
NEDD8-201ENST00000250495 EFCAB7A8K855 629 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 KIR2DS3K7RE56 304 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 SNX2O60749 519 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 SLC25A14O95258 325 aaPredicted RBP20.83■□□□□ 0.93
NEDD8-201ENST00000250495 F3P13726 295 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 ARSDP51689 593 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 NFATC2Q13469 925 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 KIR2DS5Q14953 304 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 LRRC38Q5VT99 294 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 CCDC70Q6NSX1 233 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 FAM129CQ86XR2 697 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 IL22RA1Q8N6P7 574 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 NCSTNQ92542 709 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 AGAP3Q96P47 875 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 TEFMQ96QE5 360 aaKnown RBP20.83■□□□□ 0.93
NEDD8-201ENST00000250495 SRPK1Q96SB4 655 aaKnown RBP20.83■□□□□ 0.93
NEDD8-201ENST00000250495 ZSCAN5AQ9BUG6 496 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 TRIM39Q9HCM9 518 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 OCIAD1Q9NX40 245 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 ATXN10Q9UBB4 475 aa20.83■□□□□ 0.93
NEDD8-201ENST00000250495 GPR89AB7ZAQ6 455 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 MTA2O94776 668 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 GPR89BP0CG08 455 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 UGT1A3P35503 534 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 SLC1A1P43005 524 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 CLCNKAP51800 687 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 EPHA4P54764 986 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 CDK18Q07002 472 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 SLC14A2Q15849 920 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 ZNF569Q5MCW4 686 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 SNAP47Q5SQN1 464 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 PDPK2PQ6A1A2 396 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 BZW1Q7L1Q6 419 aaKnown RBP20.82■□□□□ 0.92
NEDD8-201ENST00000250495 KDELC2Q7Z4H8 507 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 ARHGAP22Q7Z5H3 698 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 TMC3Q7Z5M5 1100 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 RFX6Q8HWS3 928 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 PHYKPLQ8IUZ5 450 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 TRAM1L1Q8N609 369 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 PMEPA1Q969W9 287 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 EID2BQ96D98 161 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 TRIB3Q96RU7 358 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 CHP1Q99653 195 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 GPR63Q9BZJ6 419 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 FAM117AQ9C073 453 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 EPB41L1Q9H4G0 881 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 NHEJ1Q9H9Q4 299 aaPredicted RBP20.82■□□□□ 0.92
NEDD8-201ENST00000250495 ABHD10Q9NUJ1 306 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 DDX56Q9NY93 547 aaKnown RBP20.82■□□□□ 0.92
NEDD8-201ENST00000250495 SHOC2Q9UQ13 582 aa20.82■□□□□ 0.92
NEDD8-201ENST00000250495 A6NCN8 305 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 A8MU76 341 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 SLC28A2O43868 658 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 KRT1P04264 644 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 ZNF8P17098 575 aaPredicted RBP20.81■□□□□ 0.92
NEDD8-201ENST00000250495 WT1P19544 449 aaPredicted RBP20.81■□□□□ 0.92
NEDD8-201ENST00000250495 DCDC1P59894 354 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 NFATC3Q12968 1075 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 TBR1Q16650 682 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 TEX44Q53QW1 395 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 RHOT1Q8IXI2 618 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 GPR26Q8NDV2 337 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 RNF25Q96BH1 459 aaPredicted RBP20.81■□□□□ 0.92
NEDD8-201ENST00000250495 OLFM3Q96PB7 478 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 CEP41Q9BYV8 373 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 OR2AG1Q9H205 316 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 NFKBIL1Q9UBC1 381 aaPredicted RBP20.81■□□□□ 0.92
NEDD8-201ENST00000250495 CPNE7Q9UBL6 633 aa20.81■□□□□ 0.92
NEDD8-201ENST00000250495 HEMK1Q9Y5R4 338 aaPredicted RBP20.81■□□□□ 0.92
NEDD8-201ENST00000250495 PIRTP0C851 137 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 CYP4F2P78329 520 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 MC2RQ01718 297 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 PCSK7Q16549 785 aa20.8■□□□□ 0.92
NEDD8-201ENST00000250495 ALS2CLQ60I27 953 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms