RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ARHGEF17Q96PE2 2063 aaPredicted RBP24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 TMEM8BA6NDV4 472 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 B4DGG1 531 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 E7EVH7 732 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 GRID2O43424 1007 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 NOBOXO60393 691 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 PNLIPP16233 465 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 GLB1P16278 677 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 AK4P27144 223 aaPredicted RBP24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 HADHAP40939 763 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 ACTR1BP42025 376 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 ACTR1AP61163 376 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 ATP13A5Q4VNC0 1218 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 ADGRG6Q86SQ4 1221 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 TMEM121BQ9BXQ6 578 aaPredicted RBP24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 ZCCHC2Q9C0B9 1178 aaKnown RBP24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 ETNK1Q9HBU6 452 aa24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 SPATS2LQ9NUQ6 558 aaKnown RBP24.09■■□□□ 1.45
SDF2L1-201ENST00000248958 MYLKQ15746 1914 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 CHUKO15111 745 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 BUD23O43709 281 aaKnown RBP24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 GAS8O95995 478 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 MT-CO3P00414 261 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 ZNF8P17098 575 aaPredicted RBP24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 LMAN1P49257 510 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 HLTFQ14527 1009 aaKnown RBP eCLIP24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 CHRNA6Q15825 494 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 LDLRAP1Q5SW96 308 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 CDCP2Q5VXM1 449 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 SLC30A9Q6PML9 568 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 FAM151BQ6UXP7 276 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 GSTA5Q7RTV2 222 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 OR4K2Q8NGD2 314 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 GDAP1Q8TB36 358 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 OR2AG1Q9H205 316 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 SMOXQ9NWM0 555 aa24.08■■□□□ 1.45
SDF2L1-201ENST00000248958 CES2O00748 559 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 NUDT21O43809 227 aaKnown RBP24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 TCEA3O75764 348 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 SUN1O94901 812 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 CLCNKAP51800 687 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 CCDC173Q0VFZ6 552 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 CDH17Q12864 832 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 SEMA5AQ13591 1074 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 GTF2H3Q13889 308 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 PERM1Q5SV97 790 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 CHST15Q7LFX5 561 aaPredicted RBP24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 C17orf82Q86X59 251 aaPredicted RBP24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 DCBLD1Q8N8Z6 715 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 ZNF398Q8TD17 642 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 TTC25Q96NG3 672 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 DEPDC7Q96QD5 511 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 CCDC3Q9BQI4 270 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 RAB6BQ9NRW1 208 aa24.07■■□□□ 1.44
SDF2L1-201ENST00000248958 KMOO15229 486 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 ZW10O43264 779 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 CDK14O94921 469 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 ZNF140P52738 457 aaPredicted RBP24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 TMEM115Q12893 351 aaPredicted RBP24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 TARDBPQ13148 414 aaKnown RBP eCLIP24.06■■□□□ 1.442e-29■■■■□ 25.2
SDF2L1-201ENST00000248958 LAMB3Q13751 1172 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 CERCAMQ5T4B2 595 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 LRRTM4Q86VH4 590 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 DDHD1Q8NEL9 900 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 CCDC74AQ96AQ1 378 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 GRAMD1AQ96CP6 724 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 TMPRSS11EQ9UL52 423 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 PLEKHM1Q9Y4G2 1056 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 ST14Q9Y5Y6 855 aa24.06■■□□□ 1.44
SDF2L1-201ENST00000248958 FAM149AA5PLN7 773 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 C1QTNF9BB2RNN3 333 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 LDB2O43679 373 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 SRP72O76094 671 aaKnown RBP24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 PRAMEF1O95521 474 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 PROS1P07225 676 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 C1QTNF9P0C862 333 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 SLC2A4P14672 509 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 ETS1P14921 441 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 RPL22P35268 128 aaKnown RBP24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 CAMK2BQ13554 666 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 PPP1R21Q6ZMI0 780 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 NAGSQ8N159 534 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 TAB3Q8N5C8 712 aaPredicted RBP24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 PRELID2Q8N945 189 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 DNAAF3Q8N9W5 541 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 ACTRT1Q8TDG2 376 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 STYXQ8WUJ0 223 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 OSBPL9Q96SU4 736 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 ASB8Q9H765 288 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 ARFGAP3Q9NP61 516 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 LRIT1Q9P2V4 623 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 FKBPLQ9UIM3 349 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 SNX12Q9UMY4 172 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 RP1P56715 2156 aa24.05■■□□□ 1.44
SDF2L1-201ENST00000248958 KMT2BQ9UMN6 2715 aaPredicted RBP24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 ASXL3Q9C0F0 2248 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 CACNA1BQ00975 2339 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 H7C0S8 307 aa24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 PGRMC1O00264 195 aaKnown RBP24.04■■□□□ 1.44
SDF2L1-201ENST00000248958 GAPDHSO14556 408 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms