RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 MAGP20916 626 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 KCNT1Q5JUK3 1230 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 FAM205BPQ63HN1 556 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 ADAMTSL2Q86TH1 951 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 PHF13Q86YI8 300 aaPredicted RBP19.77■□□□□ 0.76
HOXC13-201ENST00000243056 SFRP1Q8N474 314 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 POC5Q8NA72 575 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.77■□□□□ 0.76
HOXC13-201ENST00000243056 GIMAP1Q8WWP7 306 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 DPF3Q92784 378 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 FTHL17Q9BXU8 183 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 B3GNT5Q9BYG0 378 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 MKRN2Q9H000 416 aaKnown RBP19.77■□□□□ 0.76
HOXC13-201ENST00000243056 MIR1-1HGQ9H1L0 117 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 TMEM161AQ9NX61 479 aa19.77■□□□□ 0.76
HOXC13-201ENST00000243056 COPG1Q9Y678 874 aaKnown RBP19.77■□□□□ 0.76
HOXC13-201ENST00000243056 GRAP2O75791 330 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 BEST1O76090 585 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 CCR10P46092 362 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 PXDC1Q5TGL8 231 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 LINC00299Q6ZSB3 139 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 NECAB2Q7Z6G3 386 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 GATAD2AQ86YP4 633 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 GALNT12Q8IXK2 581 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 ABI1Q8IZP0 508 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 TP53I13Q8NBR0 393 aaPredicted RBP19.76■□□□□ 0.75
HOXC13-201ENST00000243056 LEMD2Q8NC56 503 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 OR5H6Q8NGV6 325 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 CASD1Q96PB1 797 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 LRRC40Q9H9A6 602 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 RAB6BQ9NRW1 208 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 LRFN2Q9ULH4 789 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.76■□□□□ 0.75
HOXC13-201ENST00000243056 MYBPHLA2RUH7 354 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 UPK1BO75841 260 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 RASAL1O95294 804 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 SNAP29O95721 258 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 NTRK1P04629 796 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 JUNP05412 331 aaKnown RBP19.76■□□□□ 0.75
HOXC13-201ENST00000243056 GSTM1P09488 218 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 TFE3P19532 575 aaPredicted RBP19.76■□□□□ 0.75
HOXC13-201ENST00000243056 IL1R2P27930 398 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 RRM2P31350 389 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 MPP1Q00013 466 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 FCHO2Q0JRZ9 810 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 TBCELQ5QJ74 424 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 LRRC8EQ6NSJ5 796 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 SPATC1Q76KD6 591 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 SPRED1Q7Z699 444 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 FAM109AQ8N4B1 249 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 EMC1Q8N766 993 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 NDRG1Q92597 394 aaKnown RBP19.76■□□□□ 0.75
HOXC13-201ENST00000243056 MRPL9Q9BYD2 267 aaKnown RBP19.76■□□□□ 0.75
HOXC13-201ENST00000243056 CRTAC1Q9NQ79 661 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 AGPAT4Q9NRZ5 378 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 GMIPQ9P107 970 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 AURKCQ9UQB9 309 aa19.76■□□□□ 0.75
HOXC13-201ENST00000243056 SZT2Q5T011 3432 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 OR4Q2P0C623 313 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 ALDH4A1P30038 563 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 PTGS2P35354 604 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 OR3A3P47888 321 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 PPP5CP53041 499 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 DEFB103AP81534 67 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 PPP1R3AQ16821 1122 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 STEAP3Q658P3 488 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 NXNQ6DKJ4 435 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 TUBA3EQ6PEY2 450 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 OTOP2Q7RTS6 562 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 SPARTQ8N0X7 666 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 CELF2-AS1Q8N7Q2 184 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 RTP3Q9BQQ7 232 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 C9orf16Q9BUW7 83 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 TMEM30AQ9NV96 361 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 SMPD3Q9NY59 655 aaPredicted RBP19.75■□□□□ 0.75
HOXC13-201ENST00000243056 IL37Q9NZH6 218 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 CD300AQ9UGN4 299 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 DCDC2Q9UHG0 476 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 POLHQ9Y253 713 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 TRIM77I1YAP6 450 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 CXCL10P02778 98 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 GSTM2P28161 218 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 SHMT2P34897 504 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 Q5BKY6 102 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 NPNTQ6UXI9 565 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 LIMS2Q7Z4I7 341 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 CRIPAKQ8N1N5 446 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 DCLK2Q8N568 766 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 B3GALNT2Q8NCR0 500 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 OR2T34Q8NGX1 318 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 CLEC4CQ8WTT0 213 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 TTC9Q92623 222 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 TRIM63Q969Q1 353 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 ZFYVE19Q96K21 471 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 PSKH2Q96QS6 385 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 RWDD3Q9Y3V2 267 aa19.75■□□□□ 0.75
HOXC13-201ENST00000243056 CAPN1P07384 714 aa19.74■□□□□ 0.75
HOXC13-201ENST00000243056 IRAK1BP1Q5VVH5 260 aa19.74■□□□□ 0.75
HOXC13-201ENST00000243056 CCDC103Q8IW40 242 aa19.74■□□□□ 0.75
HOXC13-201ENST00000243056 SCUBE3Q8IX30 993 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms