RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TBC1D30Q9Y2I9 924 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 PTCH2Q9Y6C5 1203 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 IRS2Q9Y4H2 1338 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 TRIM43BA6NCK2 446 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 CDC7O00311 574 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 ARPC2O15144 300 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 ANGPTL1O95841 491 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 PABPC4LP0CB38 370 aaKnown RBP13.66□□□□□ -0.22
NFKB1-201ENST00000226574 AZGP1P25311 298 aaKnown RBP13.66□□□□□ -0.22
NFKB1-201ENST00000226574 CYP2C18P33260 490 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 GSK3BP49841 420 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 BCL2L1Q07817 233 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 MED22Q15528 200 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 ZC3H7AQ8IWR0 971 aaKnown RBP13.66□□□□□ -0.22
NFKB1-201ENST00000226574 SLC47A1Q96FL8 570 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 TMEM245Q9H330 911 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 IFT80Q9P2H3 777 aaPredicted RBP13.66□□□□□ -0.22
NFKB1-201ENST00000226574 FKBPLQ9UIM3 349 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 C10orf71Q711Q0 1435 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 AXIN1O15169 862 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 JUNP05412 331 aaKnown RBP13.66□□□□□ -0.22
NFKB1-201ENST00000226574 IL4RP24394 825 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 CRYBB1P53674 252 aaPredicted RBP13.66□□□□□ -0.22
NFKB1-201ENST00000226574 MRPL28Q13084 256 aaKnown RBP13.66□□□□□ -0.22
NFKB1-201ENST00000226574 SLC2A7Q6PXP3 512 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 ZNF605Q86T29 641 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 LRRC58Q96CX6 371 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 COX4I2Q96KJ9 171 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 SLC25A51Q9H1U9 297 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 EPS8L2Q9H6S3 715 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 MIEF1Q9NQG6 463 aa13.66□□□□□ -0.22
NFKB1-201ENST00000226574 TBKBP1A7MCY6 615 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 KPNA5O15131 536 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 EPN2O95208 641 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 GDF5P43026 501 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 TTPAP49638 278 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 PRKAG1P54619 331 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 UFM1P61960 85 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 HPCAP84074 193 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 PFKPQ01813 784 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 FAM187BQ17R55 369 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 TRNP1Q6NT89 227 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 MON1AQ86VX9 555 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.65□□□□□ -0.22
NFKB1-201ENST00000226574 PHC3Q8NDX5 983 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 PYCR2Q96C36 320 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 TEPSINQ96N21 525 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 MARCH7Q9H992 704 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 EIF2B3Q9NR50 452 aaKnown RBP13.65□□□□□ -0.22
NFKB1-201ENST00000226574 TRMT13Q9NUP7 481 aaKnown RBP13.65□□□□□ -0.22
NFKB1-201ENST00000226574 ZNF490Q9ULM2 529 aaPredicted RBP13.65□□□□□ -0.22
NFKB1-201ENST00000226574 CAB39Q9Y376 341 aaPredicted RBP13.65□□□□□ -0.22
NFKB1-201ENST00000226574 H0Y858 1186 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 HTRA2O43464 458 aaPredicted RBP13.65□□□□□ -0.22
NFKB1-201ENST00000226574 MYCLP1P12525 358 aaPredicted RBP13.65□□□□□ -0.22
NFKB1-201ENST00000226574 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 LRRC73Q5JTD7 316 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 TIFABQ6ZNK6 161 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 ABHD8Q96I13 439 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 SPON1Q9HCB6 807 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 PRKAB1Q9Y478 270 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 PPP2R3BQ9Y5P8 575 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 PRORSD1PA6NEY8 169 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 MEIS3P2A8K0S8 358 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 SDHDO14521 159 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 DPYSL4O14531 572 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 TRIM24O15164 1050 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 ANXA5P08758 320 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 FMO3P31513 532 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 RPS24P62847 133 aaKnown RBP13.65□□□□□ -0.22
NFKB1-201ENST00000226574 MRPS6P82932 125 aaKnown RBP13.65□□□□□ -0.22
NFKB1-201ENST00000226574 ABRQ12979 859 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 CTC1Q2NKJ3 1217 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 RETSATQ6NUM9 610 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 CRYBG2Q8N1P7 616 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 CLDN19Q8N6F1 224 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 ZNF614Q8N883 585 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 FEM1CQ96JP0 617 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 NODALQ96S42 347 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 NMUR1Q9HB89 426 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 KRT84Q9NSB2 600 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 IKZF3Q9UKT9 509 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 PADI3Q9ULW8 664 aa13.65□□□□□ -0.22
NFKB1-201ENST00000226574 EFCAB10A6NFE3 127 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 H3BNX3 289 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 NFKBIEO00221 500 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 PSMD11O00231 422 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 NPHS1O60500 1241 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SNNO75324 88 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SLC25A14O95258 325 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SNAP29O95721 258 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 FGF1P05230 155 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 SLC35E2BP0CK96 405 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ZBTB48P10074 688 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 CAPGP40121 348 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 PPIL2Q13356 520 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 ZNF549Q6P9A3 640 aa13.64□□□□□ -0.23
NFKB1-201ENST00000226574 TRMT11Q7Z4G4 463 aaKnown RBP13.64□□□□□ -0.23
NFKB1-201ENST00000226574 NPWQ8N729 165 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms