RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 DCP2Q8IU60 420 aaKnown RBP5.72□□□□□ -1.49
AFP-201ENST00000226359 UMODL1-AS1Q8N2C9 162 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 ATPAF2Q8N5M1 289 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 MFSD2AQ8NA29 543 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 OR52K2Q8NGK3 314 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 ZNF564Q8TBZ8 553 aaPredicted RBP5.72□□□□□ -1.49
AFP-201ENST00000226359 CXorf40AQ8TE69 158 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 HSPH1Q92598 858 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 HMCESQ96FZ2 354 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 MIPEPQ99797 713 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 SYT11Q9BT88 431 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 SNRNP25Q9BV90 132 aaKnown RBP5.72□□□□□ -1.49
AFP-201ENST00000226359 SSBP4Q9BWG4 385 aaPredicted RBP5.72□□□□□ -1.49
AFP-201ENST00000226359 GPATCH2LQ9NWQ4 482 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 UVRAGQ9P2Y5 699 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 FTSJ1Q9UET6 329 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 SERGEFQ9UGK8 458 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 IPO11Q9UI26 975 aaKnown RBP5.72□□□□□ -1.49
AFP-201ENST00000226359 CDC23Q9UJX2 597 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 TFR2Q9UP52 801 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 PCDHGB6Q9Y5F9 930 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 PCDHGB3Q9Y5G1 929 aa5.72□□□□□ -1.49
AFP-201ENST00000226359 MYOFQ9NZM1 2061 aa5.71□□□□□ -1.49
AFP-201ENST00000226359 A0A1W2PQ67 120 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 TCRBV5S1A1TA0A578 114 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 FAM72CH0Y354 149 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 K7ERQ8 282 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 TLR4O00206 839 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 PJA2O43164 708 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 SMAD6O43541 496 aaKnown RBP5.71□□□□□ -1.5
AFP-201ENST00000226359 ZMPSTE24O75844 475 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 UGT2B4P06133 528 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 IGHV4-34P06331 123 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 KRT7P08729 469 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 ADRB3P13945 408 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 ITIH2P19823 946 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 CA4P22748 312 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 SERPINA4P29622 427 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 CTSKP43235 329 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 PPP2CBP62714 309 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 PPP2CAP67775 309 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 ARF5P84085 180 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 DOC2BQ14184 412 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 TRIP6Q15654 476 aaKnown RBP5.71□□□□□ -1.5
AFP-201ENST00000226359 IFI16Q16666 785 aaKnown RBP5.71□□□□□ -1.5
AFP-201ENST00000226359 WHAMMP3Q1A5X7 153 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 ASTE1Q2TB18 679 aaPredicted RBP5.71□□□□□ -1.5
AFP-201ENST00000226359 MYLK3Q32MK0 819 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 ZNF805Q5CZA5 627 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 FAM72AQ5TYM5 149 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 FAM72DQ6L9T8 149 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 GDPD4Q6W3E5 623 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 PCGF5Q86SE9 256 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 PIP4P1Q86T03 277 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 FAM72BQ86X60 149 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 RNF10Q8N5U6 811 aaKnown RBP5.71□□□□□ -1.5
AFP-201ENST00000226359 KCT2Q8NC54 265 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 DENND6BQ8NEG7 585 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 TRIM58Q8NG06 486 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.71□□□□□ -1.5
AFP-201ENST00000226359 TEKT4Q8WW24 435 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 JADE3Q92613 823 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 ARRDC3Q96B67 414 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 TUBGCP5Q96RT8 1024 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 ELF4Q99607 663 aaPredicted RBP5.71□□□□□ -1.5
AFP-201ENST00000226359 KRTAP17-1Q9BYP8 105 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 ISCUQ9H1K1 167 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 ATP13A3Q9H7F0 1226 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.71□□□□□ -1.5
AFP-201ENST00000226359 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.71□□□□□ -1.5
AFP-201ENST00000226359 SNX11Q9Y5W9 270 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 NPFFR2Q9Y5X5 522 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 V9GYY5 206 aaPredicted RBP5.71□□□□□ -1.5
AFP-201ENST00000226359 ATG2BQ96BY7 2078 aa5.71□□□□□ -1.5
AFP-201ENST00000226359 SPAG17Q6Q759 2223 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 MUC22E2RYF6 1773 aaPredicted RBP5.7□□□□□ -1.5
AFP-201ENST00000226359 PLXND1Q9Y4D7 1925 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 C16orf96A6NNT2 1141 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 EFCAB8A8MWE9 144 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 I6L893 689 aaPredicted RBP5.7□□□□□ -1.5
AFP-201ENST00000226359 PLK4O00444 970 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 FPGTO14772 594 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 SLC31A1O15431 190 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 LATO43561 262 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 PALMO75781 387 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 CYP1A2P05177 515 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 CD3EP07766 207 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 CDK4P11802 303 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 RABIFP47224 123 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 HCAR3P49019 387 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 CDH6P55285 790 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 NXPH1P58417 271 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 TUBB4BP68371 445 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 CKAP4Q07065 602 aaKnown RBP5.7□□□□□ -1.5
AFP-201ENST00000226359 PDCD1Q15116 288 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 PIP5KL1Q5T9C9 394 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 LETMD1Q6P1Q0 360 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 BRAT1Q6PJG6 821 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 LEKR1Q6ZMV7 388 aa5.7□□□□□ -1.5
AFP-201ENST00000226359 ZNF771Q7L3S4 317 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms