RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FBXW2Q9UKT8 454 aa13.55□□□□□ -0.24
TGFBR3-201ENST00000212355 RAI2Q9Y5P3 530 aa13.55□□□□□ -0.24
TGFBR3-201ENST00000212355 LRCH4O75427 683 aa13.55□□□□□ -0.24
TGFBR3-201ENST00000212355 SMARCB1Q12824 385 aa13.55□□□□□ -0.24
TGFBR3-201ENST00000212355 LMLNQ96KR4 655 aa13.55□□□□□ -0.24
TGFBR3-201ENST00000212355 GLOD4Q9HC38 313 aa13.55□□□□□ -0.24
TGFBR3-201ENST00000212355 GALNT8Q9NY28 637 aa13.55□□□□□ -0.24
TGFBR3-201ENST00000212355 GOT2P00505 430 aaKnown RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 MTHFD1P11586 935 aaKnown RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 IDH3AP50213 366 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 ITGA1P56199 1179 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 GANABQ14697 944 aaKnown RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 C9orf64Q5T6V5 341 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF598Q86UK7 904 aaKnown RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 TMEM192Q8IY95 271 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF567Q8N184 647 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 LNX2Q8N448 690 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC44A1Q8WWI5 657 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF395Q9H8N7 513 aaPredicted RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 MFHAS1Q9Y4C4 1052 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF132P52740 706 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 C2orf80Q0P641 193 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 GFOD2Q3B7J2 385 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 SPDYCQ5MJ68 293 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 TRMT10BQ6PF06 316 aaKnown RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 ADGRG6Q86SQ4 1221 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 C12orf50Q8NA57 414 aaPredicted RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 CNPPD1Q9BV87 410 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 PCDHAC1Q9H158 963 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 DENND2DQ9H6A0 471 aaPredicted RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 SSR3Q9UNL2 185 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 SH3D21A4FU49 640 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 FTH1P02794 183 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 MMP3P08254 477 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 CLUP10909 449 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 IDO1P14902 403 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 NR1H2P55055 460 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC9B1Q4ZJI4 515 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 IL23RQ5VWK5 629 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 ARCQ7LC44 396 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 MREGQ8N565 214 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 SOCS4Q8WXH5 440 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 MKL1Q969V6 931 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 LENG8Q96PV6 779 aaPredicted RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 YIPF4Q9BSR8 244 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 MRPL9Q9BYD2 267 aaKnown RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 FADS3Q9Y5Q0 445 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 RPTORQ8N122 1335 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 MANSC4A6NHS7 340 aaPredicted RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 GPR25O00155 361 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 BMP7P18075 431 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 MYL9P24844 172 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 FMO3P31513 532 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 PBX1P40424 430 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 CDKN2BP42772 138 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 TAPT1Q6NXT6 567 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 OTOP2Q7RTS6 562 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 CTU1Q7Z7A3 348 aaKnown RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 HCRTO43612 131 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 MAGEC1O60732 1142 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 OR4F21O95013 312 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 IGFBP5P24593 272 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 RYKP34925 604 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 CRHR1P34998 444 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 CBX2Q14781 532 aaPredicted RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 LSM12Q3MHD2 195 aaKnown RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 CPTPQ5TA50 214 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 EGFLAMQ63HQ2 1017 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF730Q6ZMV8 503 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 JSRP1Q96MG2 331 aaPredicted RBP13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 CHCHD6Q9BRQ6 235 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 OSBPL11Q9BXB4 747 aa13.54□□□□□ -0.24
TGFBR3-201ENST00000212355 AFDNP55196 1824 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 PIP5K1BO14986 540 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 BIRC5O15392 142 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 LCA5LO95447 670 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 SLC35G4P0C7Q5 338 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 FOSL2P15408 326 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 CDH3P22223 829 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 CES1P23141 567 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 RPL5P46777 297 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 NAE1Q13564 534 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 CCNYL2Q5T2Q4 361 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 INTS11Q5TA45 600 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 TMEM214Q6NUQ4 689 aaKnown RBP13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 TAF8Q7Z7C8 310 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 OR10A6Q8NH74 314 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 ZNF180Q9UJW8 692 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 BTNL10A8MVZ5 291 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 INMTO95050 263 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 RASGRP1O95267 797 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 GRIA1P42261 906 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 STARP49675 285 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 PUDPQ08623 228 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 ZBTB6Q15916 424 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 KCNA10Q16322 511 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 CBR4Q8N4T8 237 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 GGA2Q9UJY4 613 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 PTPRJQ12913 1337 aa13.53□□□□□ -0.24
TGFBR3-201ENST00000212355 ITM2AO43736 263 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms