RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 FRS2Q8WU20 508 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 FUNDC2Q9BWH2 189 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 TUBB1Q9H4B7 451 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 SP110Q9HB58 689 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 PCDHB3Q9Y5E6 796 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 A0A087X1B8 175 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 FXYD1O00168 92 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 SNX2O60749 519 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 MMP3P08254 477 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 C18orf21Q32NC0 220 aaPredicted RBP16.65■□□□□ 0.26
CTDP1-201ENST00000075430 FAM126BQ8IXS8 530 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 FBXO39Q8N4B4 442 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 MAELQ96JY0 434 aaKnown RBP16.65■□□□□ 0.26
CTDP1-201ENST00000075430 MRGPRX2Q96LB1 330 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 TMEM209Q96SK2 561 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 IL12RB2Q99665 862 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 SPON2Q9BUD6 331 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 HTR3EA5X5Y0 456 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 B3GAT3O94766 335 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 GEMP55040 296 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 CHRNB3Q05901 458 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 GALNT2Q10471 571 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 USP41Q3LFD5 358 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 CCNYL2Q5T2Q4 361 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 GPR142Q7Z601 462 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 ZDHHC13Q8IUH4 622 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 ISL2Q96A47 359 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 RMDN1Q96DB5 314 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 AURKBQ96GD4 344 aaPredicted RBP16.65■□□□□ 0.26
CTDP1-201ENST00000075430 FAR2Q96K12 515 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 RHNO1Q9BSD3 238 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 BDH2Q9BUT1 245 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 NANOGQ9H9S0 305 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 SIAEQ9HAT2 523 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 CNOT11Q9UKZ1 510 aaKnown RBP16.65■□□□□ 0.26
CTDP1-201ENST00000075430 PCDHGA8Q9Y5G5 932 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 ARID2Q68CP9 1835 aa16.65■□□□□ 0.26
CTDP1-201ENST00000075430 DLGAP3O95886 979 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 RFC2P35250 354 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 SERPINH1P50454 418 aaKnown RBP16.64■□□□□ 0.25
CTDP1-201ENST00000075430 CLCNKBP51801 687 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 INAQ16352 499 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 DCAF4L1Q3SXM0 396 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 PDCD4Q53EL6 469 aaKnown RBP16.64■□□□□ 0.25
CTDP1-201ENST00000075430 TINF2Q9BSI4 451 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 CD274Q9NZQ7 290 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 RCOR3Q9P2K3 495 aaPredicted RBP16.64■□□□□ 0.25
CTDP1-201ENST00000075430 DNAJC25-GNG10A0A024R161 153 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 MTSS1O43312 755 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 CLPXO76031 633 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 OR4F21O95013 312 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 CST1P01037 141 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 IMPDH1P20839 514 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 MOGQ16653 247 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 SV2CQ496J9 727 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 PAQR3Q6TCH7 311 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 ENPP6Q6UWR7 440 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 PAGE2Q7Z2X7 111 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 CLIP4Q8N3C7 705 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 ZMIZ2Q8NF64 920 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 OR10A6Q8NH74 314 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 AP5M1Q9H0R1 490 aa16.64■□□□□ 0.25
CTDP1-201ENST00000075430 NPEPPSL1A6NEC2 478 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 IQCF5A8MTL0 148 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 PSMD11O00231 422 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 ACOX3O15254 700 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 NCAM2O15394 837 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 CREB5Q02930 508 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 NR6A1Q15406 480 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 KIAA2013Q8IYS2 634 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 PHACTR4Q8IZ21 702 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 C8orf59Q8N0T1 100 aaPredicted RBP16.63■□□□□ 0.25
CTDP1-201ENST00000075430 C2CD4AQ8NCU7 369 aaPredicted RBP16.63■□□□□ 0.25
CTDP1-201ENST00000075430 MYRFLQ96LU7 910 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 RIBC2Q9H4K1 309 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 ACTR3BQ9P1U1 418 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 ATP11BQ9Y2G3 1177 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 TMEM221A6NGB7 291 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 ARVCFO00192 962 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 SNAP91O60641 907 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 MITFO75030 526 aaPredicted RBP16.63■□□□□ 0.25
CTDP1-201ENST00000075430 SH3BGRLO75368 114 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 TBX18O95935 607 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 CD4P01730 458 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 CNPP09543 421 aaKnown RBP16.63■□□□□ 0.25
CTDP1-201ENST00000075430 PIGAP37287 484 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 GRIK1P39086 918 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 AQP6Q13520 282 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 LGI2Q8N0V4 545 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 FAM162AQ96A26 154 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 HNRNPABQ99729 332 aaKnown RBP16.63■□□□□ 0.25
CTDP1-201ENST00000075430 HGH1Q9BTY7 390 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 NDEL1Q9GZM8 345 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 VTA1Q9NP79 307 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 PSME2Q9UL46 239 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 BCAS1O75363 584 aaPredicted RBP16.63■□□□□ 0.25
CTDP1-201ENST00000075430 MYO1DO94832 1006 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 RASAL1O95294 804 aa16.63■□□□□ 0.25
CTDP1-201ENST00000075430 FADS2O95864 444 aaKnown RBP16.63■□□□□ 0.25
CTDP1-201ENST00000075430 THRBP10828 461 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms