RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Vmn2r44L7N2E1 861 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Dsc2P55292 902 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Adora2aQ60613 410 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pwwp2aQ69Z61 730 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Adamts2Q8C9W3 1213 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Baz2aQ91YE5 1889 aaKnown RBP15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Chit1Q9D7Q1 464 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Phf10Q9D8M7 497 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ccdc194A0A140LIT1 234 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tnip3A0A1D5RMN0 279 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Sppl2cA2A6C4 690 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Zmynd12A2BGJ5 363 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Olfr726E9Q8X3 321 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Vmn2r54K7N649 806 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 P01679 107 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tgm2P21981 686 aaKnown RBP15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 CryaaP24622 196 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 PpargP37238 505 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 RabggtbP53612 339 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Olfr725Q05A45 321 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Treml2Q2LA85 329 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Rap1gap2Q5SVL6 712 aaKnown RBP15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Atp11bQ6DFW5 1175 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 B3galnt2Q8BG28 504 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mettl3Q8C3P7 580 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Exd2Q8VEG4 650 aaKnown RBP15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Nsmce2Q91VT1 247 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 PdiltQ9DAN1 588 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ddx59Q9DBN9 619 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gpc1Q9QZF2 557 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Zbed5B2RPU8 756 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ptch2O35595 1182 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 InvsO89019 1062 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 PdgfaP20033 211 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Kif5aP33175 1027 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ephb3P54754 993 aaKnown RBP15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mrps6P58064 125 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ext2P70428 718 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pag1Q3U1F9 429 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Akr1clQ3UXL1 322 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Anapc2Q8BZQ7 837 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Lypd3Q91YK8 363 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pacsin3Q99JB8 424 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Nipsnap3bQ9CQE1 247 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Prorsd1Q9D820 169 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gprc5dQ9JIL6 344 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 CdylQ9WTK2 593 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 LipaQ9Z0M5 397 aa15.79■□□□□ 0.12
Trim39-203ENSMUST00000113706 Irs2P81122 1321 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ttc30a2A2AKQ8 664 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tmem45a2B7ZWJ5 289 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Zbtb10E9Q8X5 861 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gm4847G3X946 537 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Adam15O88839 864 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 PfklP12382 780 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ctla2bP12400 113 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mxd1P50538 227 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Fpr-rs6Q3SXG2 339 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Klhl5Q6PFE1 708 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Bnip1Q6QD59 228 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Olfr342Q8VGK7 312 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pcdhb10Q91VE5 797 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 L2hgdhQ91YP0 464 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ddx50Q99MJ9 734 aaKnown RBP15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ttc30bQ9CY00 664 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gbe1Q9D6Y9 702 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Asap1Q9QWY8 1147 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ap1m2Q9WVP1 423 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mcf2A2AEU1 1111 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Gm13101A2ASJ0 481 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ptar1E9QAB6 424 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 P01636 108 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tfap2aP34056 437 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pdx1P52946 284 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pex2P55098 305 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Fam47cQ14BE7 430 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Pnrc1Q3TWH3 297 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 G2e3Q5RJY2 716 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Tnfaip2Q61333 691 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Bcl2l1Q64373 233 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Snx31Q6P8Y7 439 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 4931406P16RikQ8C5X1 1059 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 ProzQ9CQW3 399 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ap2b1Q9DBG3 937 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Aldh1a3Q9JHW9 512 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cdh17Q9R100 827 aa15.78■□□□□ 0.12
Trim39-203ENSMUST00000113706 Fam46dB1ATX6 390 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Rhox2gL7MUB9 191 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Vmn2r46L7N282 809 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cxcr3O88410 367 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 WapP01173 134 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 HmgclP38060 325 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Cyth2P63034 400 aaKnown RBP15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 CcnhQ61458 323 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Fam126aQ6P9N1 521 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Ddx42Q810A7 929 aaKnown RBP15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Nox1Q8CIZ9 591 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Serpina3nQ91WP6 418 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 Mlf2Q99KX1 247 aa15.77■□□□□ 0.12
Trim39-203ENSMUST00000113706 TcimQ9D915 106 aa15.77■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms