RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Pcdhb6Q91XZ4 772 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 MecrQ9DCS3 373 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fbxo17Q9QZM8 286 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Padi3Q9Z184 664 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 VarsQ9Z1Q9 1263 aaKnown RBP15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Vmn2r84D3YWE3 849 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Prpmp5E9PXN1 296 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slc6a20bO88575 635 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cdkl4Q3TZA2 342 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Naa11Q3UX61 218 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Jak2Q62120 1129 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Glt8d2Q640P4 349 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cfap97Q6ZPR1 541 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ppm1lQ8BHN0 360 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 BoraQ8BS90 525 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slc6a20aQ8VDB9 592 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Stap1Q9JM90 297 aaKnown RBP15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gria3Q9Z2W9 888 aa15.47■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Psmd7P26516 321 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Hnf4aP49698 474 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Fam35aQ3UEN2 891 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mapkapk3Q3UMW7 384 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 KrtdapQ3V2T4 102 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr1355Q7TQU9 310 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Msantd1Q8BIL2 278 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Smarcal1Q8BJL0 910 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Vps26bQ8C0E2 336 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Akr1c21Q91WR5 323 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Rpl38Q9JJI8 70 aaKnown RBP15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Scn11aQ9R053 1765 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Glipr1l3A0A1W2P7V2 236 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Nsmce4aG3XA30 381 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Stat5aP42230 793 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Coq10bQ3THF9 240 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 KizQ3UXL4 695 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ppm1hQ3UYC0 513 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Uimc1Q5U5Q9 727 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Adam2Q60718 735 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Nomo1Q6GQT9 1214 aaKnown RBP15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 AtminQ6P9S1 818 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mfn2Q80U63 757 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Atp2c1Q80XR2 918 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Slco2b1Q8BXB6 683 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Mospd1Q8VEL0 213 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 TraipQ8VIG6 470 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Actr3Q99JY9 418 aaKnown RBP15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Trem2Q99NH8 227 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Ephx1Q9D379 455 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 GmprQ9DCZ1 345 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cib1Q9Z0F4 191 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gm13101A2ASJ0 481 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Gm13119B1ARV5 481 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 WasP70315 520 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Eif2b4Q61749 524 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Cd300aQ6SJQ0 318 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Olfr1198Q7TR12 308 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 HpgdQ8VCC1 269 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Atp5f1Q9CQQ7 256 aaKnown RBP15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Dkk3Q9QUN9 349 aa15.46■□□□□ 0.07
Ccdc88b-201ENSMUST00000113440 Capza2P47754 286 aa15.46■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Klhl26Q8BGY4 606 aa15.46■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm6377Q8BHV4 303 aa15.46■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cyp2g1Q9WV19 494 aa15.46■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ccdc163A2AGD7 326 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ebf3O08791 596 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Spp1P10923 294 aaKnown RBP15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 DbtP53395 482 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 S100a13P97352 98 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Clec12aQ504P2 267 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mup21Q80YX8 181 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nmur2Q8BZ39 395 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 TdrpQ8C5P7 182 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Samd7Q8C8Y5 445 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Wdr55Q9CX97 388 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cdkn2aipnlQ9D211 116 aaKnown RBP15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Haus5Q9D786 619 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 DiabloQ9JIQ3 237 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Atp6ap1Q9R1Q9 463 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm6509A0A0J9YUV1 481 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Zfp277E9Q6D6 583 aaKnown RBP15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr694K7N641 315 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm6351K9J7D1 481 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mtnd4P03911 459 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ifrd1P19182 449 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Dsc2P55292 902 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Usp46P62069 366 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 StyxQ60969 223 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ppp2r1bQ7TNP2 601 aaKnown RBP15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Zfyve1Q810J8 777 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 D3Ertd751eQ8BGN2 192 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Wdr26Q8C6G8 641 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ccdc88aQ5SNZ0 1873 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 6720489N17RikA0A1Y7VJW0 127 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Kif28pD3YXS5 1028 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Adamts14E9PX39 1209 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r38G3UYA8 861 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r33K7N705 861 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Agtr2P35374 363 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mapkapk2P49138 386 aa15.45■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Col28a1Q2UY11 1141 aa15.45■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms