RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Olfr722Q8VFC8 308 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Depdc7Q91WS7 511 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Vsig1Q9D2J4 407 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Efhd2Q9D8Y0 240 aaKnown RBP18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Vmn2r14E9Q759 848 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Siah1bQ06985 282 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Olfr1080Q7TR67 313 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Sit1Q8C503 180 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Hid1Q8R1F6 788 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 McmbpQ8R3C0 642 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Pabpc4lG5E8X2 370 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Bmp2P21274 394 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Erp29P57759 262 aaKnown RBP18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Igsf9Q05BQ1 1179 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Lingo4Q149C3 593 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 NaprtQ8CC86 538 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Dennd1aQ8K382 1016 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ly6kQ9CWP4 154 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Mcemp1Q9D8U6 183 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Mid2Q9QUS6 705 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Clcn2Q9R0A1 908 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 FarsbQ9WUA2 589 aaKnown RBP18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gm35911A0A1D5RLS7 214 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Olfr603L7N1Y4 312 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 MttpO08601 894 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Atn1O35126 1175 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ifrd1P19182 449 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Trpv5P69744 723 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 MlipQ5FW52 269 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Fem1cQ8CEF1 617 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Mtg1Q8R2R6 326 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Btbd19S4R1I0 287 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Cdc6O89033 562 aaKnown RBP18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ezh1P70351 747 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Aldh3b1Q80VQ0 468 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Tspan18Q80WR1 248 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 TbceQ8CIV8 524 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Smpd3Q9JJY3 655 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ninj2Q9JL89 143 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Atp6v1c1Q9Z1G3 382 aa18.28■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Vmn2r125D3Z3M1 369 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Kifc5bE9PUA5 672 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Idh2P54071 452 aaKnown RBP18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Dnajc11Q5U458 559 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 ParpbpQ6IRT3 573 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Fam3aQ9D8T0 230 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Slc16a8O35308 492 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 PctpP53808 214 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Polr3bP59470 1133 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Znf865Q3U3I9 1058 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gtf2a1lQ8R4I4 468 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 MiosQ8VE19 875 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Vmn1r3A2AMT7 306 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gm6882J3KMT3 313 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 P01740 135 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 S100a6P14069 89 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 DbtP53395 482 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Myl12bQ3THE2 172 aaKnown RBP18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Gm10662Q3UT86 313 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Fam129aQ3UW53 926 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Vmn1r79Q8R285 306 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 4933425L06RikQ9D3Z8 585 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Mzb1Q9D8I1 188 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 Ap3m1Q9JKC8 418 aa18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 PpieQ9QZH3 301 aaKnown RBP18.27■□□□□ 0.52
Scaf11-201ENSMUST00000047835 DgkdE9PUQ8 1220 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Spp1P10923 294 aaKnown RBP18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 TktP40142 623 aaKnown RBP18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Mc1rQ01727 315 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Nxpe4Q52KP5 543 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 HnrnpdQ60668 355 aaKnown RBP18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Nr0b2Q62227 260 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Lrrc4Q99PH1 652 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Arl8bQ9CQW2 186 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Slc25a11Q9CR62 314 aaKnown RBP18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Actrt1Q9D9J3 376 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Aldh9a1Q9JLJ2 494 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 ApipQ9WVQ5 241 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Lactbl1S4R213 581 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Tmem236A2ARJ3 344 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 TagapB2RWW0 714 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Ap5b1Q3TAP4 876 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Znf354cQ571J5 560 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Snx32Q80ZJ7 404 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Nipal4Q8BZF2 406 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 C1raQ8CG16 707 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Slc15a4Q91W98 574 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Q99LU8 229 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Gtf2h2Q9JIB4 396 aa18.27■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Sirpb1aA0A0A6YYP6 397 aa18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Sema3aO08665 772 aa18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Ces1cP23953 554 aa18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Casp7P97864 303 aa18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 TsnQ62348 228 aaKnown RBP18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Galnt13Q8CF93 556 aa18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Lrrc66Q8K0B3 872 aa18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 RorbQ8R1B8 470 aa18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Vmn1r219Q8R271 312 aa18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Adap2Q8R2V5 381 aa18.26■□□□□ 0.51
Scaf11-201ENSMUST00000047835 Gm16286Q9CQX6 220 aa18.26■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms