RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	THEM5	Q8N1Q8	247 aa		13.77	□□□□□ -0.21
PHGDH-233	ENST00000642021	SDR16C5	Q8N3Y7	309 aa		13.77	□□□□□ -0.21
PHGDH-233	ENST00000642021	TRPV3	Q8NET8	790 aa		13.77	□□□□□ -0.21
PHGDH-233	ENST00000642021	ESAM	Q96AP7	390 aa		13.77	□□□□□ -0.21
PHGDH-233	ENST00000642021	ISOC1	Q96CN7	298 aa		13.77	□□□□□ -0.21
PHGDH-233	ENST00000642021	CENPN	Q96H22	339 aa	Predicted RBP	13.77	□□□□□ -0.21
PHGDH-233	ENST00000642021	TMEM74	Q96NL1	305 aa		13.77	□□□□□ -0.21
PHGDH-233	ENST00000642021	MIA3	Q5JRA6	1907 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	GRK4	P32298	578 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	AGTR2	P50052	363 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	MAPRE1	Q15691	268 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	KCTD21	Q4G0X4	260 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	GPR141	Q7Z602	305 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	DCP1B	Q8IZD4	617 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	PACRGL	Q8N7B6	248 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	CYGB	Q8WWM9	190 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	C12orf43	Q96C57	262 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	SMIM14	Q96QK8	99 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	DCUN1D5	Q9BTE7	237 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	PIF1	Q9H611	641 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	GALP	Q9UBC7	116 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	CLEC11A	Q9Y240	323 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021		A0A087WXM4	84 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	TCRBV5S2	A0A599	114 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	NCF1B	A6NI72	391 aa	Predicted RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	NCF1C	A8MVU1	366 aa	Predicted RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	CDC7	O00311	574 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	ENPP3	O14638	875 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	KPNA6	O60684	536 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	BAIAP3	O94812	1187 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	HMBS	P08397	361 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	NCF1	P14598	390 aa	Predicted RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	MAGEA10	P43363	369 aa	Predicted RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	ENTPD1	P49961	510 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	UFM1	P61960	85 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	POLD3	Q15054	466 aa	Predicted RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	PYCR3	Q53H96	274 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	UGT3A1	Q6NUS8	523 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	PRMT9	Q6P2P2	845 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	CHST15	Q7LFX5	561 aa	Predicted RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	SPRED1	Q7Z699	444 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	MIB1	Q86YT6	1006 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	KIAA2013	Q8IYS2	634 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	KLHDC9	Q8NEP7	349 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	OR4L1	Q8NH43	312 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	RHEBL1	Q8TAI7	183 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	ADAMTS16	Q8TE57	1224 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	NSMCE3	Q96MG7	304 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	ACOX2	Q99424	681 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	AARSD1	Q9BTE6	412 aa	Known RBP	13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	GMIP	Q9P107	970 aa		13.76	□□□□□ -0.21
PHGDH-233	ENST00000642021	TRIM64	A6NGJ6	449 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	SUPT3H	B4E1H0	165 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	SUPT3H	O75486	399 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	VARS	P26640	1264 aa	Known RBP	13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	YWHAH	Q04917	246 aa	Predicted RBP	13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	TNK2	Q07912	1038 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	BNIP2	Q12982	314 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	PMS2P3	Q13401	168 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	TUSC3	Q13454	348 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	TSN	Q15631	228 aa	Known RBP	13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	ZBED5	Q49AG3	693 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	GNAS	Q5JWF2	1037 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	LYSMD3	Q7Z3D4	306 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	GPR180	Q86V85	440 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	MON1A	Q86VX9	555 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	DCBLD1	Q8N8Z6	715 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	NUDT8	Q8WV74	236 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	SUSD3	Q96L08	255 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	ASB2	Q96Q27	587 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	NPL	Q9BXD5	320 aa	Predicted RBP	13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	ALG2	Q9H553	416 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	TFB2M	Q9H5Q4	396 aa	Known RBP	13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	GID8	Q9NWU2	228 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	FNIP2	Q9P278	1114 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021		V9GYQ6	96 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021		A0A1W2PP18	115 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	UBA6	A0AVT1	1052 aa	Predicted RBP	13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	ZNF623	O75123	536 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	ATE1	O95260	518 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	RASAL1	O95294	804 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	FMO4	P31512	558 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	YAP1	P46937	504 aa	Known RBP	13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	SCNN1B	P51168	640 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	STC1	P52823	247 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	LIPE	Q05469	1076 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	LCP2	Q13094	533 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	NFYC	Q13952	458 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	MRNIP	Q6NTE8	343 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	DUS1L	Q6P1R4	473 aa	Known RBP	13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	ELMSAN1	Q6PJG2	1045 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	TBPL2	Q6SJ96	375 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	TTC9B	Q8N6N2	239 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	GPR150	Q8NGU9	434 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	FATE1	Q969F0	183 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	BIRC8	Q96P09	236 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	SLC30A3	Q99726	388 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	C9orf16	Q9BUW7	83 aa		13.75	□□□□□ -0.21
PHGDH-233	ENST00000642021	ASB1	Q9Y576	335 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms