RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CKMT2P17540 419 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 FDFT1P37268 417 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 MICALCLQ6ZW33 695 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 SFTPA2Q8IWL1 248 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 CCDC89Q8N998 374 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 ZSCAN5AQ9BUG6 496 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 BOCQ9BWV1 1114 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 RAB6BQ9NRW1 208 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 PAK5Q9P286 719 aa26.48■■□□□ 1.83
VEGFA-231ENST00000640499 GOLGA4Q13439 2230 aaKnown RBP26.48■■□□□ 1.83
VEGFA-231ENST00000640499 ZNF106Q9H2Y7 1883 aaKnown RBP26.47■■□□□ 1.83
VEGFA-231ENST00000640499 GPR39O43194 453 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 GNPDA1P46926 289 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 ELOCQ15369 112 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 CHRNA6Q15825 494 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 ATP13A5Q4VNC0 1218 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 KHDC1Q4VXA5 237 aaKnown RBP26.47■■□□□ 1.83
VEGFA-231ENST00000640499 RAB44Q7Z6P3 723 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-231ENST00000640499 OR52K1Q8NGK4 314 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 DTX3LQ8TDB6 740 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 GPBAR1Q8TDU6 330 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 MAGOHBQ96A72 148 aaKnown RBP26.47■■□□□ 1.83
VEGFA-231ENST00000640499 DUSP23Q9BVJ7 150 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 SUDS3Q9H7L9 328 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-231ENST00000640499 FEZ2Q9UHY8 353 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-231ENST00000640499 NEU2Q9Y3R4 380 aa26.47■■□□□ 1.83
VEGFA-231ENST00000640499 ANXA6P08133 673 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 CKMT1AP12532 417 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 LPOP22079 712 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-231ENST00000640499 ACP1P24666 158 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 ZNF140P52738 457 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-231ENST00000640499 PYCR3Q53H96 274 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 C6orf132Q5T0Z8 1188 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 MARK2Q7KZI7 788 aaKnown RBP26.46■■□□□ 1.83
VEGFA-231ENST00000640499 ADGRG6Q86SQ4 1221 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 OR4K2Q8NGD2 314 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 OR13C4Q8NGS5 318 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 ADAMTS14Q8WXS8 1223 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 GLYATL1Q969I3 302 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.46■■□□□ 1.83
VEGFA-231ENST00000640499 ATXN10Q9UBB4 475 aa26.46■■□□□ 1.83
VEGFA-231ENST00000640499 PLXNB3Q9ULL4 1909 aa26.45■■□□□ 1.83
VEGFA-231ENST00000640499 ERI2A8K979 691 aaKnown RBP26.45■■□□□ 1.82
VEGFA-231ENST00000640499 STX7O15400 261 aaKnown RBP26.45■■□□□ 1.82
VEGFA-231ENST00000640499 UGT1A9O60656 530 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 ALPPL2P10696 532 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 UGT1A6P19224 532 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 UGT1A1P22309 533 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 UGT1A4P22310 534 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 UGT1A3P35503 534 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 UGT1A5P35504 534 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 COILP38432 576 aaPredicted RBP26.45■■□□□ 1.82
VEGFA-231ENST00000640499 SPAM1P38567 509 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 ADCY8P40145 1251 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 FOXC1Q12948 553 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 PDPK2PQ6A1A2 396 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 ZCCHC8Q6NZY4 707 aaKnown RBP26.45■■□□□ 1.82
VEGFA-231ENST00000640499 LVRNQ6Q4G3 990 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 FAM151BQ6UXP7 276 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 CREG2Q8IUH2 290 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 SLC35F3Q8IY50 421 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 SDR16C5Q8N3Y7 309 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 CHCHD4Q8N4Q1 142 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 UGT1A7Q9HAW7 530 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 UGT1A10Q9HAW8 530 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 UGT1A8Q9HAW9 530 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 TRNAU1APQ9NX07 287 aaKnown RBP26.45■■□□□ 1.82
VEGFA-231ENST00000640499 VPS18Q9P253 973 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 APOBEC2Q9Y235 224 aaKnown RBP26.45■■□□□ 1.82
VEGFA-231ENST00000640499 PRKAB1Q9Y478 270 aa26.45■■□□□ 1.82
VEGFA-231ENST00000640499 ARHGEF17Q96PE2 2063 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-231ENST00000640499 C2orf81A6NN90 581 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 MTX2O75431 263 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 ZNF8P17098 575 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-231ENST00000640499 TCP1P17987 556 aaKnown RBP26.44■■□□□ 1.82
VEGFA-231ENST00000640499 SPINK2P20155 84 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 AK4P27144 223 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-231ENST00000640499 ACTN2P35609 894 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 XIAPP98170 497 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 TRIP13Q15645 432 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-231ENST00000640499 GSTA5Q7RTV2 222 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 GKN2Q86XP6 184 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 VPS35Q96QK1 796 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 NAPGQ99747 312 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-231ENST00000640499 TRIM39Q9HCM9 518 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 CASS4Q9NQ75 786 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 FKBPLQ9UIM3 349 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 PKP3Q9Y446 797 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 PTPRBP23467 1997 aa26.44■■□□□ 1.82
VEGFA-231ENST00000640499 ASXL3Q9C0F0 2248 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 GLYATL1P3A0A0U1RQE8 302 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 CCL22O00626 93 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 HYAL3O43820 417 aaPredicted RBP26.43■■□□□ 1.82
VEGFA-231ENST00000640499 PPFIA2O75334 1257 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 SLC25A14O95258 325 aaPredicted RBP26.43■■□□□ 1.82
VEGFA-231ENST00000640499 ASMTLO95671 621 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 FOXK2Q01167 660 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 CTBSQ01459 385 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 POU6F1Q14863 301 aa26.43■■□□□ 1.82
VEGFA-231ENST00000640499 CERCAMQ5T4B2 595 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms