RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 ZNF438Q7Z4V0 828 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 ZC3H18Q86VM9 953 aaKnown RBP25.01■■□□□ 1.59
VEGFA-230ENST00000640482 NAGSQ8N159 534 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 CCDC97Q96F63 343 aaPredicted RBP25.01■■□□□ 1.59
VEGFA-230ENST00000640482 VAT1Q99536 393 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 SPATA16Q9BXB7 569 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 DPH1Q9BZG8 443 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 GPR63Q9BZJ6 419 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 PRORYQ9H606 182 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 RMI1Q9H9A7 625 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 KLHL8Q9P2G9 620 aaPredicted RBP25.01■■□□□ 1.59
VEGFA-230ENST00000640482 ZNHIT2Q9UHR6 403 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 ZNF711Q9Y462 761 aa25.01■■□□□ 1.59
VEGFA-230ENST00000640482 OAS3Q9Y6K5 1087 aaKnown RBP25.01■■□□□ 1.59
VEGFA-230ENST00000640482 PMS2P1A4D2B8 440 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 HACD1B0YJ81 288 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 DNAJC6O75061 913 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 SLC4A1P02730 911 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 ATP1A1P05023 1023 aaKnown RBP25■■□□□ 1.59
VEGFA-230ENST00000640482 ALDH4A1P30038 563 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 NAP1L1P55209 391 aaKnown RBP25■■□□□ 1.59
VEGFA-230ENST00000640482 DCDC1P59894 354 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 WASHC5Q12768 1159 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 MAP9Q49MG5 647 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 ZNF569Q5MCW4 686 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 TMC3Q7Z5M5 1100 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 CLEC14AQ86T13 490 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 PATE1Q8WXA2 126 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 KRT35Q92764 455 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 HAUS1Q96CS2 278 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 EID2BQ96D98 161 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 ZSCAN5AQ9BUG6 496 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 UBP1Q9NZI7 540 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 FAM153AQ9UHL3 310 aa25■■□□□ 1.59
VEGFA-230ENST00000640482 CPNE6O95741 557 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 CD68P34810 354 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-230ENST00000640482 UGT1A5P35504 534 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 GPR3P46089 330 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 UCNP55089 124 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 OR1D5P58170 312 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 COPS2P61201 443 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 ZFP36L1Q07352 338 aaKnown RBP24.99■■□□□ 1.59
VEGFA-230ENST00000640482 CLPPQ16740 277 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-230ENST00000640482 ALS2CLQ60I27 953 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 PDPK2PQ6A1A2 396 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 PIM3Q86V86 326 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 TMEM159Q96B96 161 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 FCRL3Q96P31 734 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-230ENST00000640482 QKIQ96PU8 341 aaKnown RBP eCLIP24.99■■□□□ 1.59
VEGFA-230ENST00000640482 NFKBIL1Q9UBC1 381 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-230ENST00000640482 ITPR1Q14643 2758 aa24.99■■□□□ 1.59
VEGFA-230ENST00000640482 B4GAT1O43505 415 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 JMJD7P0C870 316 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 NFKB1P19838 968 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 CTNNA1P35221 906 aaKnown RBP24.98■■□□□ 1.59
VEGFA-230ENST00000640482 AMZ1Q400G9 498 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 CCDC181Q5TID7 509 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 BBS12Q6ZW61 710 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 CHST15Q7LFX5 561 aaPredicted RBP24.98■■□□□ 1.59
VEGFA-230ENST00000640482 TRAM1L1Q8N609 369 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 GPR26Q8NDV2 337 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 HTR3CQ8WXA8 447 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 HEMGNQ9BXL5 484 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 CARD9Q9H257 536 aa24.98■■□□□ 1.59
VEGFA-230ENST00000640482 RCCD1A6NED2 376 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 BTNL10A8MVZ5 291 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 APOC4-APOC2K7ER74 178 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 KLK10O43240 276 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 APOC2P02655 101 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 XRCC4Q13426 336 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 PID1Q7Z2X4 250 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 SLITRK4Q8IW52 837 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 ZNF567Q8N184 647 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 FCRL5Q96RD9 977 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 CMKLR1Q99788 373 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 TRHDEQ9UKU6 1024 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 PRKAB1Q9Y478 270 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 LOXL2Q9Y4K0 774 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 PCDHA3Q9Y5H8 950 aa24.97■■□□□ 1.59
VEGFA-230ENST00000640482 NBEAQ8NFP9 2946 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 PPM1DO15297 605 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 GRID2O43424 1007 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 NUAK1O60285 661 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 SLC25A14O95258 325 aaPredicted RBP24.96■■□□□ 1.59
VEGFA-230ENST00000640482 EPOP01588 193 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 WNT3AP56704 352 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 TMPRSS3P57727 454 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 PHF19Q5T6S3 580 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 RAD9BQ6WBX8 426 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 PHYKPLQ8IUZ5 450 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 FERMT1Q9BQL6 677 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 TRABDQ9H4I3 376 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 RDH14Q9HBH5 336 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 AKAP7Q9P0M2 348 aaPredicted RBP24.96■■□□□ 1.59
VEGFA-230ENST00000640482 EFR3BQ9Y2G0 817 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 PCDHGA7Q9Y5G6 932 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 PCYT1BQ9Y5K3 369 aaPredicted RBP24.96■■□□□ 1.59
VEGFA-230ENST00000640482 DUSP10Q9Y6W6 482 aa24.96■■□□□ 1.59
VEGFA-230ENST00000640482 LOC285095A0A1B0GVY8 99 aa24.95■■□□□ 1.58
VEGFA-230ENST00000640482 CCDC66A2RUB6 948 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms