RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 ZNF569Q5MCW4 686 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 ZNF438Q7Z4V0 828 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 CCNJLQ8IV13 435 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 TRAM1L1Q8N609 369 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 TTC13Q8NBP0 860 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 DTX3LQ8TDB6 740 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 ZDHHC1Q8WTX9 485 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 POLR1BQ9H9Y6 1135 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 RSPH14Q9UHP6 348 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 CNOT6Q9ULM6 557 aaKnown RBP17.57■□□□□ 0.4
PTPN11-207ENST00000639857 GPSM3Q9Y4H4 160 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 ENTPD2Q9Y5L3 495 aa17.57■□□□□ 0.4
PTPN11-207ENST00000639857 INPP4BO15327 924 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 DNAJC6O75061 913 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 FGF1P05230 155 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 RBP3P10745 1247 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 RBL1P28749 1068 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 GABREP78334 506 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 EIF3IQ13347 325 aaKnown RBP17.56■□□□□ 0.4
PTPN11-207ENST00000639857 TBC1D25Q3MII6 688 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 KDELC2Q7Z4H8 507 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 SPRED1Q7Z699 444 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 TRIM74Q86UV6 250 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 GPR26Q8NDV2 337 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 CCDC112Q8NEF3 446 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 PTCD2Q8WV60 388 aaKnown RBP17.56■□□□□ 0.4
PTPN11-207ENST00000639857 LIN37Q96GY3 246 aaPredicted RBP17.56■□□□□ 0.4
PTPN11-207ENST00000639857 OXNAD1Q96HP4 312 aaPredicted RBP17.56■□□□□ 0.4
PTPN11-207ENST00000639857 MRGPRX2Q96LB1 330 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 ZNF578Q96N58 590 aaPredicted RBP17.56■□□□□ 0.4
PTPN11-207ENST00000639857 GFM1Q96RP9 751 aaKnown RBP17.56■□□□□ 0.4
PTPN11-207ENST00000639857 DESI2Q9BSY9 194 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 FSD1LQ9BXM9 530 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 CARD9Q9H257 536 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 LRRN3Q9H3W5 708 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 SPATS2LQ9NUQ6 558 aaKnown RBP17.56■□□□□ 0.4
PTPN11-207ENST00000639857 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTPN11-207ENST00000639857 LRIT1Q9P2V4 623 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 RABGEF1Q9UJ41 708 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 SHOC2Q9UQ13 582 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 TMEM98Q9Y2Y6 226 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 PCDHGA8Q9Y5G5 932 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 FAM208BQ5VWN6 2430 aa17.56■□□□□ 0.4
PTPN11-207ENST00000639857 GOLGA6L9A6NEM1 432 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 PPFIA2O75334 1257 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 ASMTLO95671 621 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 RPLP0P05388 317 aaKnown RBP17.55■□□□□ 0.4
PTPN11-207ENST00000639857 PIRTP0C851 137 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 PYGMP11217 842 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 AK4P27144 223 aaPredicted RBP17.55■□□□□ 0.4
PTPN11-207ENST00000639857 CCKBRP32239 447 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 ACTR1BP42025 376 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 PDX1P52945 283 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 GEMP55040 296 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 EIF3EP60228 445 aaKnown RBP17.55■□□□□ 0.4
PTPN11-207ENST00000639857 ERVPABLB-1P60509 514 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 ACTR1AP61163 376 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 SLC1A5Q15758 541 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 SIRPB2Q5JXA9 342 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 SLC30A9Q6PML9 568 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 PHYKPLQ8IUZ5 450 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 FGF11Q92914 225 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 TMEM74Q96NL1 305 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 VPS35Q96QK1 796 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 HERPUD2Q9BSE4 406 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 SPATA16Q9BXB7 569 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 SUDS3Q9H7L9 328 aaPredicted RBP17.55■□□□□ 0.4
PTPN11-207ENST00000639857 UBP1Q9NZI7 540 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 AAR2Q9Y312 384 aaKnown RBP17.55■□□□□ 0.4
PTPN11-207ENST00000639857 ST14Q9Y5Y6 855 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 OAS3Q9Y6K5 1087 aaKnown RBP17.55■□□□□ 0.4
PTPN11-207ENST00000639857 RNF215Q9Y6U7 377 aa17.55■□□□□ 0.4
PTPN11-207ENST00000639857 CCDC187A0A096LP49 1063 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 A0A1W2PQM1 296 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 ARHGAP6O43182 974 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 ATP1A1P05023 1023 aaKnown RBP17.54■□□□□ 0.4
PTPN11-207ENST00000639857 BPIP17213 487 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 GPR3P46089 330 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 CCL7P80098 99 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 NAGSQ8N159 534 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 IPMKQ8NFU5 416 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 WDR36Q8NI36 951 aaKnown RBP17.54■□□□□ 0.4
PTPN11-207ENST00000639857 GLYATL1Q969I3 302 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 ATXN7L3BQ96GX2 97 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 HES6Q96HZ4 224 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 STRADBQ9C0K7 418 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 SYNDIG1Q9H7V2 258 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 TRIM39Q9HCM9 518 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 TRIM10Q9UDY6 481 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 SPO11Q9Y5K1 396 aa17.54■□□□□ 0.4
PTPN11-207ENST00000639857 DDX3YO15523 660 aaKnown RBP17.53■□□□□ 0.4
PTPN11-207ENST00000639857 RRP8O43159 456 aaKnown RBP17.53■□□□□ 0.4
PTPN11-207ENST00000639857 KRT86O43790 486 aa17.53■□□□□ 0.4
PTPN11-207ENST00000639857 NUAK1O60285 661 aa17.53■□□□□ 0.4
PTPN11-207ENST00000639857 SLC25A14O95258 325 aaPredicted RBP17.53■□□□□ 0.4
PTPN11-207ENST00000639857 ECEL1O95672 775 aa17.53■□□□□ 0.4
PTPN11-207ENST00000639857 SLC4A1P02730 911 aa17.53■□□□□ 0.4
PTPN11-207ENST00000639857 MPOP05164 745 aa17.53■□□□□ 0.4
PTPN11-207ENST00000639857 PTMAP06454 111 aaKnown RBP17.53■□□□□ 0.4
PTPN11-207ENST00000639857 SLC2A4P14672 509 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms