RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 GFERP55789 205 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 CT47A1Q5JQC4 288 aaPredicted RBP14.87□□□□□ -0.03
SYNE2-228ENST00000639659 PLEKHA7Q6IQ23 1121 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 RASGRP3Q8IV61 690 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 CBARPQ8N350 705 aaPredicted RBP14.87□□□□□ -0.03
SYNE2-228ENST00000639659 GALNT6Q8NCL4 622 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 EXD1Q8NHP7 514 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 PIH1D2Q8WWB5 315 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 SPOCK2Q92563 424 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 MIB2Q96AX9 1013 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 SH3KBP1Q96B97 665 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 STAMBPL1Q96FJ0 436 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 SPRY4Q9C004 299 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 ARFGAP3Q9NP61 516 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 SARS2Q9NP81 518 aaKnown RBP14.87□□□□□ -0.03
SYNE2-228ENST00000639659 PDP2Q9P2J9 529 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 CROTQ9UKG9 612 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 CHKBQ9Y259 395 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 TMEM184BQ9Y519 407 aaPredicted RBP14.87□□□□□ -0.03
SYNE2-228ENST00000639659 KCTD3Q9Y597 815 aa14.87□□□□□ -0.03
SYNE2-228ENST00000639659 OAS3Q9Y6K5 1087 aaKnown RBP14.87□□□□□ -0.03
SYNE2-228ENST00000639659 RASSF9O75901 435 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 CLDN7O95471 211 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 PYGLP06737 847 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 SLC2A4P14672 509 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 TCF4P15884 667 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 TYRP1P17643 537 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 UQCRFS1P47985 274 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 HCAR3P49019 387 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 ZNF135P52742 658 aaPredicted RBP14.86□□□□□ -0.03
SYNE2-228ENST00000639659 CDH6P55285 790 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 DSC2Q02487 901 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 PTSQ03393 145 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 PLA2G4EQ3MJ16 856 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 IYDQ6PHW0 289 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 C6orf15Q6UXA7 325 aaPredicted RBP14.86□□□□□ -0.03
SYNE2-228ENST00000639659 ASB18Q6ZVZ8 466 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 LPCAT1Q8NF37 534 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 COX14Q96I36 57 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 TGM7Q96PF1 710 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 CSPG4P5Q96PW8 444 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 HERPUD2Q9BSE4 406 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.86□□□□□ -0.03
SYNE2-228ENST00000639659 LNPEPQ9UIQ6 1025 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 KCNMB2Q9Y691 235 aa14.86□□□□□ -0.03
SYNE2-228ENST00000639659 TEX15Q9BXT5 2789 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 A0A0J9YYE9 177 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 CLEC18AA5D8T8 446 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 DNAJC6O75061 913 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 KIAA0754O94854 1291 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 AGFG2O95081 481 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 TRBC1P01850 177 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 SLC4A1P02730 911 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 F3P13726 295 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 ZNF30P17039 623 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 IL1R2P27930 398 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 SERPINB6P35237 376 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 STC1P52823 247 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 EPHA4P54764 986 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 SH3BP2P78314 561 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 KRT81Q14533 505 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 SEPT7Q16181 437 aaKnown RBP14.85□□□□□ -0.03
SYNE2-228ENST00000639659 ASIC2Q16515 512 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 RALGPS1Q5JS13 557 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 PPP1R2P3Q6NXS1 205 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 CRTC3Q6UUV7 619 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 CLEC18BQ6UXF7 455 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 ZNF765Q7L2R6 523 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 LYSMD3Q7Z3D4 306 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 POLNQ7Z5Q5 900 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 TMEM135Q86UB9 458 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 PLXDC1Q8IUK5 500 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 PHYKPLQ8IUZ5 450 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 PSTKQ8IV42 348 aaKnown RBP14.85□□□□□ -0.03
SYNE2-228ENST00000639659 TRIM48Q8IWZ4 208 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 CCDC13Q8IYE1 715 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 EFCAB3Q8N7B9 438 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 CLEC18CQ8NCF0 446 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 PSMG3-AS1Q96PY0 264 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 OR6C1Q96RD1 312 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 POLR1EQ9GZS1 481 aaKnown RBP14.85□□□□□ -0.03
SYNE2-228ENST00000639659 PRDM8Q9NQV8 689 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 CPNE7Q9UBL6 633 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 LIMA1Q9UHB6 759 aaKnown RBP14.85□□□□□ -0.03
SYNE2-228ENST00000639659 POLHQ9Y253 713 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 SCINQ9Y6U3 715 aa14.85□□□□□ -0.03
SYNE2-228ENST00000639659 ZNF106Q9H2Y7 1883 aaKnown RBP14.84□□□□□ -0.03
SYNE2-228ENST00000639659 C1orf232A0A0U1RR37 186 aa14.84□□□□□ -0.03
SYNE2-228ENST00000639659 VPS4BO75351 444 aa14.84□□□□□ -0.03
SYNE2-228ENST00000639659 RFPL1O75677 317 aa14.84□□□□□ -0.03
SYNE2-228ENST00000639659 FTLP02792 175 aaPredicted RBP14.84□□□□□ -0.03
SYNE2-228ENST00000639659 FURINP09958 794 aa14.84□□□□□ -0.03
SYNE2-228ENST00000639659 AMD1P17707 334 aa14.84□□□□□ -0.03
SYNE2-228ENST00000639659 CASP14P31944 242 aa14.84□□□□□ -0.03
SYNE2-228ENST00000639659 GJC1P36383 396 aa14.84□□□□□ -0.03
SYNE2-228ENST00000639659 SSR1P43307 286 aaKnown RBP14.84□□□□□ -0.03
SYNE2-228ENST00000639659 DPYSL2Q16555 572 aa14.84□□□□□ -0.03
SYNE2-228ENST00000639659 ZNF648Q5T619 568 aaPredicted RBP14.84□□□□□ -0.03
SYNE2-228ENST00000639659 ALS2CLQ60I27 953 aa14.84□□□□□ -0.03
SYNE2-228ENST00000639659 ERGIC2Q96RQ1 377 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms