RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TRIM74Q86UV6 250 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 PPP1R3BQ86XI6 285 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 IQCKQ8N0W5 287 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 LZTR1Q8N653 840 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 CPA5Q8WXQ8 436 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 TGM7Q96PF1 710 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 CATSPERBQ9H7T0 1116 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 SIX2Q9NPC8 291 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 CPNE7Q9UBL6 633 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 PCYT1BQ9Y5K3 369 aaPredicted RBP17.96■□□□□ 0.47
CLN6-212ENST00000636020 NAV3Q8IVL0 2385 aa17.96■□□□□ 0.47
CLN6-212ENST00000636020 PSMD11O00231 422 aa17.95■□□□□ 0.46
CLN6-212ENST00000636020 LSM8O95777 96 aaKnown RBP17.95■□□□□ 0.46
CLN6-212ENST00000636020 CYP11B1P15538 503 aa17.95■□□□□ 0.46
CLN6-212ENST00000636020 LPOP22079 712 aaPredicted RBP17.95■□□□□ 0.46
CLN6-212ENST00000636020 LHCGRP22888 699 aa17.95■□□□□ 0.46
CLN6-212ENST00000636020 TECPR1Q7Z6L1 1165 aa17.95■□□□□ 0.46
CLN6-212ENST00000636020 MSANTD4Q8NCY6 345 aa17.95■□□□□ 0.46
CLN6-212ENST00000636020 JOSD2Q8TAC2 188 aa17.95■□□□□ 0.46
CLN6-212ENST00000636020 FAM172AQ8WUF8 416 aa17.95■□□□□ 0.46
CLN6-212ENST00000636020 HERPUD2Q9BSE4 406 aa17.95■□□□□ 0.46
CLN6-212ENST00000636020 RUBCNLQ9H714 662 aa17.95■□□□□ 0.46
CLN6-212ENST00000636020 KIR2DS5A0A0G2JLQ3 304 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 A0A0G2JNG1 304 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 SSU72P8A0A1W2PR75 194 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 KIR2DS3K7RE56 304 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 HTRA2O43464 458 aaPredicted RBP17.94■□□□□ 0.46
CLN6-212ENST00000636020 CREB3O43889 395 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 SCNN1BP51168 640 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 AP1S1P61966 158 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 RPS15P62841 145 aaKnown RBP17.94■□□□□ 0.46
CLN6-212ENST00000636020 KIR2DS5Q14953 304 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 ZRSR2Q15696 482 aaKnown RBP17.94■□□□□ 0.46
CLN6-212ENST00000636020 TAF3Q5VWG9 929 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 RFLNAQ6ZTI6 216 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 ADAMTS17Q8TE56 1095 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 KLHL6Q8WZ60 621 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 SMAD5Q99717 465 aaKnown RBP17.94■□□□□ 0.46
CLN6-212ENST00000636020 BARD1Q99728 777 aaKnown RBP17.94■□□□□ 0.46
CLN6-212ENST00000636020 CINPQ9BW66 212 aaPredicted RBP17.94■□□□□ 0.46
CLN6-212ENST00000636020 ZNHIT2Q9UHR6 403 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 MAN1B1Q9UKM7 699 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 G3BP2Q9UN86 482 aaKnown RBP17.94■□□□□ 0.46
CLN6-212ENST00000636020 CTNND2Q9UQB3 1225 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 FARSAQ9Y285 508 aaKnown RBP17.94■□□□□ 0.46
CLN6-212ENST00000636020 PRKAB1Q9Y478 270 aa17.94■□□□□ 0.46
CLN6-212ENST00000636020 HEATR9A2RTY3 570 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 ZNF185O15231 689 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 F3P13726 295 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 SLC2A4P14672 509 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 TYRP1P17643 537 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 TNFAIP3P21580 790 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 PAPOLAP51003 745 aaKnown RBP17.93■□□□□ 0.46
CLN6-212ENST00000636020 STX17P56962 302 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 UBE2IP63279 158 aaKnown RBP17.93■□□□□ 0.46
CLN6-212ENST00000636020 NOMO3P69849 1222 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 CDK18Q07002 472 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 CHST15Q7LFX5 561 aaPredicted RBP17.93■□□□□ 0.46
CLN6-212ENST00000636020 PRSS42Q7Z5A4 293 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 GLIS1Q8NBF1 620 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 POM121Q96HA1 1249 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 COX14Q96I36 57 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 CELF6Q96J87 481 aaKnown RBP17.93■□□□□ 0.46
CLN6-212ENST00000636020 FCRL4Q96PJ5 515 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 SLC39A8Q9C0K1 460 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 ABCG8Q9H221 673 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 UCK1Q9HA47 277 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 KCNK6Q9Y257 313 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 PCDHGC4Q9Y5F7 938 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 SLC30A1Q9Y6M5 507 aa17.93■□□□□ 0.46
CLN6-212ENST00000636020 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.92■□□□□ 0.46
CLN6-212ENST00000636020 A0A1W2PQ67 120 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 GTPBP10A4D1E9 387 aaKnown RBP17.92■□□□□ 0.46
CLN6-212ENST00000636020 NPIPB15A6NHN6 443 aaPredicted RBP17.92■□□□□ 0.46
CLN6-212ENST00000636020 A6NL46 340 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 OR5K4A6NMS3 321 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 LRRTM2O43300 516 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 KIF1CO43896 1103 aaKnown RBP17.92■□□□□ 0.46
CLN6-212ENST00000636020 DNAJC6O75061 913 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 RASSF9O75901 435 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 UBXN7O94888 489 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 CYP2A6P11509 494 aaPredicted RBP17.92■□□□□ 0.46
CLN6-212ENST00000636020 PER3P56645 1201 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 PTPRRQ15256 657 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 CRB2Q5IJ48 1285 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 NAA35Q5VZE5 725 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 PWWP2BQ6NUJ5 590 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 TSPAN33Q86UF1 283 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 AVL9Q8NBF6 648 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 AP2M1Q96CW1 435 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 LURAP1Q96LR2 239 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 GPR83Q9NYM4 423 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 CD84Q9UIB8 345 aa17.92■□□□□ 0.46
CLN6-212ENST00000636020 SVILO95425 2214 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 TTC24A2A3L6 582 aaPredicted RBP17.91■□□□□ 0.46
CLN6-212ENST00000636020 ARHGAP42A6NI28 874 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 FGF10O15520 208 aaPredicted RBP17.91■□□□□ 0.46
CLN6-212ENST00000636020 SNX2O60749 519 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 TMEM63AO94886 807 aa17.91■□□□□ 0.46
CLN6-212ENST00000636020 CPP00450 1065 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms