RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	FGF1	P05230	155 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	VLDLR	P98155	873 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	CTBP1	Q13363	440 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	ABRAXAS1	Q6UWZ7	409 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	VIT	Q6UXI7	678 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	WASH2P	Q6VEQ5	465 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	ANKRD52	Q8NB46	1076 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	ZMIZ2	Q8NF64	920 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	SETD7	Q8WTS6	366 aa	Known RBP	13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	PIK3R3	Q92569	461 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	ALAD	P13716	330 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	C2orf80	Q0P641	193 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	IL18	Q14116	193 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	UTS2B	Q765I0	119 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	RASGEF1B	Q0VAM2	473 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	RFTN2	Q52LD8	501 aa	Predicted RBP	13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	HECTD2	Q5U5R9	776 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	KATNAL2	Q8IYT4	538 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	POC5	Q8NA72	575 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	COQ8B	Q96D53	544 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	HSFY1	Q96LI6	401 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	MAP4K5	Q9Y4K4	846 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	FRMPD4	Q14CM0	1322 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	OR1F1	O43749	312 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	CDK14	O94921	469 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	THAP5	Q7Z6K1	395 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	SLC22A15	Q8IZD6	547 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	CHID1	Q9BWS9	393 aa		13.82	□□□□□ -0.2
NRXN1-222	ENST00000625672	LRIG2	O94898	1065 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	CALCA	P01258	141 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	S100A6	P06703	90 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	RPIA	P49247	311 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	DGKE	P52429	567 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	RNF43	Q68DV7	783 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	EMID1	Q96A84	441 aa	Predicted RBP	13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	DPYSL5	Q9BPU6	564 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	CPED1	A4D0V7	1026 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	MECP2	P51608	486 aa	Known RBP	13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	PIK3C3	Q8NEB9	887 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	CD99L2	Q8TCZ2	262 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	LRRN4	Q8WUT4	740 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	KLHL32	Q96NJ5	620 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	CCDC115	Q96NT0	180 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	PNO1	Q9NRX1	252 aa	Known RBP	13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	IQCF5	A8MTL0	148 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	NOL4	O94818	638 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	CHAF1B	Q13112	559 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	C4orf46	Q504U0	113 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	MBOAT7	Q96N66	472 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	SRMS	Q9H3Y6	488 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	PAGE1	O75459	146 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	CORO7	P57737	925 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	CDK18	Q07002	472 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	SLC20A2	Q08357	652 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	ST3GAL1	Q11201	340 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	SNAPC1	Q16533	368 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	MAP4K3	Q8IVH8	894 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	ZNF615	Q8N8J6	731 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	SHC3	Q92529	594 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	PTPN18	Q99952	460 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	KCNK4	Q9NYG8	393 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	FPGT	O14772	594 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	IDO1	P14902	403 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	AGXT	P21549	392 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	RGS8	P57771	180 aa	Predicted RBP	13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	SLC8B1	Q6J4K2	584 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	TCAIM	Q8N3R3	496 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	ETNPPL	Q8TBG4	499 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	C1GALT1C1	Q96EU7	318 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	CNTNAP1	P78357	1384 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	BPNT1	O95861	308 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	GLI1	P08151	1106 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	ATP6V0D1	P61421	351 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	C12orf29	Q8N999	325 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	COMMD4	Q9H0A8	199 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	KCNQ5	Q9NR82	932 aa		13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
NRXN1-222	ENST00000625672	SELP	P16109	830 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	S100A1	P23297	94 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	ALDH4A1	P30038	563 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	RYK	P34925	604 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	CDKL1	Q00532	357 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	KIAA0895	Q8NCT3	520 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	SRFBP1	Q8NEF9	429 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	ACO2	Q99798	780 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	KCTD5	Q9NXV2	234 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	GSC2	O15499	205 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	CHST10	O43529	356 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	CLEC3A	O75596	197 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	SLC7A1	P30825	629 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	FAM131A	Q6UXB0	335 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	ARMC10	Q8N2F6	343 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	ZSCAN1	Q8NBB4	408 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	CBX6	O95503	412 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	BLK	P51451	505 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	MON1A	Q86VX9	555 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	KCT2	Q8NC54	265 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	NMUR1	Q9HB89	426 aa		13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	DCTN2	Q13561	401 aa	Known RBP	13.8	□□□□□ -0.2
NRXN1-222	ENST00000625672	LIPM	Q5VYY2	423 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms