RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	ATP11A	P98196	1134 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	OGDH	Q02218	1023 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	ELOA	Q14241	798 aa	Known RBP	10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	TDRD12	Q587J7	1177 aa	Known RBP	10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	WDR74	Q6RFH5	385 aa	Predicted RBP	10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	GDF7	Q7Z4P5	450 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	FAM131B	Q86XD5	332 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	DNAAF5	Q86Y56	855 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	FAM172A	Q8WUF8	416 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	SNRNP40	Q96DI7	357 aa	Known RBP	10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	TRIM11	Q96F44	468 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	MCEE	Q96PE7	176 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	NCAPG	Q9BPX3	1015 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	TRIM5	Q9C035	493 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	ACTL8	Q9H568	366 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	RUBCNL	Q9H714	662 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	ACSS2	Q9NR19	701 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	ASF1B	Q9NVP2	202 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	TRNAU1AP	Q9NX07	287 aa	Known RBP	10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	KLHL3	Q9UH77	587 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	NEU3	Q9UQ49	428 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	ATP8A1	Q9Y2Q0	1164 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	PCDHGB7	Q9Y5F8	929 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	ST14	Q9Y5Y6	855 aa		10.26	□□□□□ -0.77
RRP12-215	ENST00000622320	DIDO1	Q9BTC0	2240 aa	Known RBP	10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	ANKRD62	A6NC57	917 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	ARGFX	A6NJG6	315 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	TMCO5B	A8MYB1	307 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	INSIG1	O15503	277 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	CCP110	O43303	1012 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	KIAA0754	O94854	1291 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	RECK	O95980	971 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	CYP1A2	P05177	515 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	TRIM23	P36406	574 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	GARS	P41250	739 aa	Known RBP	10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	ACTR1B	P42025	376 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	FASLG	P48023	281 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	CCL11	P51671	97 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	ZNF75D	P51815	510 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	AIF1	P55008	147 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	PER3	P56645	1201 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	ACTR1A	P61163	376 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	RHOA	P61586	193 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	CTBS	Q01459	385 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	FOXM1	Q08050	763 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	SLC18A3	Q16572	532 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	UGP2	Q16851	508 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	UGT8	Q16880	541 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	SP5	Q6BEB4	398 aa	Predicted RBP	10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	ALKBH5	Q6P6C2	394 aa	Known RBP	10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	CNGA4	Q8IV77	575 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	IQCK	Q8N0W5	287 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	PELI3	Q8N2H9	469 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	ARFGAP1	Q8N6T3	406 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	RBMXL3	Q8N7X1	1067 aa	Known RBP	10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	TC2N	Q8N9U0	490 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	SLC37A2	Q8TED4	501 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	CT55	Q8WUE5	264 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	THAP4	Q8WY91	577 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	RANBP9	Q96S59	729 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	SLC38A3	Q99624	504 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	MRPL47	Q9HD33	250 aa	Known RBP	10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	NDFIP2	Q9NV92	336 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	PPARGC1A	Q9UBK2	798 aa	Known RBP	10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	CNOT8	Q9UFF9	292 aa	Known RBP	10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	HPCAL4	Q9UM19	191 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	SUFU	Q9UMX1	484 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	MFHAS1	Q9Y4C4	1052 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	SCIN	Q9Y6U3	715 aa		10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	PRRC2C	Q9Y520	2896 aa	Known RBP	10.25	□□□□□ -0.77
RRP12-215	ENST00000622320	NAV3	Q8IVL0	2385 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	DNHD1	Q96M86	4753 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	PDE2A	O00408	941 aa	Predicted RBP	10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	ATMIN	O43313	823 aa	Predicted RBP	10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	NDUFA10	O95299	355 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	ELFN1	P0C7U0	828 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	FECH	P22830	423 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	RALGDS	Q12967	914 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	PEX6	Q13608	980 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	ZRSR2	Q15696	482 aa	Known RBP	10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	CDO1	Q16878	200 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	CFAP58	Q5T655	872 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	DCUN1D2	Q6PH85	259 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	HPS6	Q86YV9	775 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	RHOT1	Q8IXI2	618 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	CCDC185	Q8N715	623 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	NETO2	Q8NC67	525 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	PTCD2	Q8WV60	388 aa	Known RBP	10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	SEC14L1	Q92503	715 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	NCSTN	Q92542	709 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	ZNF653	Q96CK0	615 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	EXOC2	Q96KP1	924 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	CHP1	Q99653	195 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	ANP32E	Q9BTT0	268 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	MAGEB5	Q9BZ81	275 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	TRIM7	Q9C029	511 aa		10.24	□□□□□ -0.77
RRP12-215	ENST00000622320	ING2	Q9H160	280 aa		10.24	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms