RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 CCNYL2Q5T2Q4 361 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 RNF135Q8IUD6 432 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 SULF1Q8IWU6 871 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 TBC1D21Q8IYX1 336 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 TMEM199Q8N511 208 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 FKBP10Q96AY3 582 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 ZNF599Q96NL3 588 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 KCNA7Q96RP8 456 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 TINF2Q9BSI4 451 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 GID8Q9NWU2 228 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 GMIPQ9P107 970 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 PCDHGA11Q9Y5H2 935 aa13.02□□□□□ -0.32
SKP2-209ENST00000620197 MBL2P11226 248 aaPredicted RBP13.02□□□□□ -0.33
SKP2-209ENST00000620197 LBPP18428 481 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 MATN1P21941 496 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 RPL9P32969 192 aaKnown RBP13.02□□□□□ -0.33
SKP2-209ENST00000620197 MLLT6P55198 1093 aaPredicted RBP13.02□□□□□ -0.33
SKP2-209ENST00000620197 NFATC3Q12968 1075 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 C16orf72Q14CZ0 275 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 FSCN1Q16658 493 aaKnown RBP13.02□□□□□ -0.33
SKP2-209ENST00000620197 DDIASQ8IXT1 998 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 LEMD2Q8NC56 503 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 SCAMP5Q8TAC9 235 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 KIAA1191Q96A73 305 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 CSF3RQ99062 836 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 PAAF1Q9BRP4 392 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 ABCC13Q9NSE7 274 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 TMEM248Q9NWD8 314 aa13.02□□□□□ -0.33
SKP2-209ENST00000620197 KERAO60938 352 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 SIX3O95343 332 aaPredicted RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 SNAP29O95721 258 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 CLIC3O95833 236 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 CCR1P32246 355 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 LCP2Q13094 533 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 TMEM26Q6ZUK4 368 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 MRPL10Q7Z7H8 261 aaKnown RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 PTGR2Q8N8N7 351 aaPredicted RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 OR10T2Q8NGX3 314 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 PPP1R13LQ8WUF5 828 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 FBLIM1Q8WUP2 373 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 SLC35B4Q969S0 331 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 NUSAP1Q9BXS6 441 aaKnown RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 DERL2Q9GZP9 239 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 A0A1W2PPW3 197 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 UBXN8O00124 270 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 MTHFD1P11586 935 aaKnown RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 IL12AP29459 219 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 PRAMEP78395 509 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 LAIR2Q6ISS4 152 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 MSANTD2Q6P1R3 559 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 DLEU7Q6UYE1 221 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 PRR23BQ6ZRT6 265 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.01□□□□□ -0.33
SKP2-209ENST00000620197 PJA1Q8NG27 643 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 OR2T11Q8NH01 316 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 NPLOC4Q8TAT6 608 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 PLEKHA8Q96JA3 519 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 NANOGQ9H9S0 305 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 TIMM13Q9Y5L4 95 aaPredicted RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 SERPINB7O75635 380 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 ALPLP05186 524 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 HTR1AP08908 422 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 PCSK1P29120 753 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 DIO3P55073 304 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 MLLT10P55197 1068 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 CDH13P55290 713 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 NAA20P61599 178 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 RABL3Q5HYI8 236 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 GPR142Q7Z601 462 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 LDB1Q86U70 411 aaPredicted RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 GIPC3Q8TF64 312 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 DCPSQ96C86 337 aaKnown RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 COX4I2Q96KJ9 171 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 AARSD1Q9BTE6 412 aaKnown RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 TMEM165Q9HC07 324 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 MID1IP1Q9NPA3 183 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 RGS18Q9NS28 235 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 FAF1Q9UNN5 650 aaPredicted RBP13.01□□□□□ -0.33
SKP2-209ENST00000620197 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 PCDHB3Q9Y5E6 796 aa13.01□□□□□ -0.33
SKP2-209ENST00000620197 OR51F1A6NGY5 319 aa13□□□□□ -0.33
SKP2-209ENST00000620197 J3KR12 359 aa13□□□□□ -0.33
SKP2-209ENST00000620197 CLOCKO15516 846 aa13□□□□□ -0.33
SKP2-209ENST00000620197 MT-CO1P00395 513 aa13□□□□□ -0.33
SKP2-209ENST00000620197 ENO2P09104 434 aaPredicted RBP13□□□□□ -0.33
SKP2-209ENST00000620197 HAPLN1P10915 354 aaPredicted RBP13□□□□□ -0.33
SKP2-209ENST00000620197 CD9P21926 228 aa13□□□□□ -0.33
SKP2-209ENST00000620197 ACVR2AP27037 513 aa13□□□□□ -0.33
SKP2-209ENST00000620197 RENBPP51606 427 aa13□□□□□ -0.33
SKP2-209ENST00000620197 LIPEQ05469 1076 aa13□□□□□ -0.33
SKP2-209ENST00000620197 SLC10A7Q0GE19 358 aa13□□□□□ -0.33
SKP2-209ENST00000620197 SEPT6Q14141 434 aa13□□□□□ -0.33
SKP2-209ENST00000620197 GABPB2Q8TAK5 448 aaPredicted RBP13□□□□□ -0.33
SKP2-209ENST00000620197 TRUB1Q8WWH5 349 aaKnown RBP13□□□□□ -0.33
SKP2-209ENST00000620197 BIRC7Q96CA5 298 aa13□□□□□ -0.33
SKP2-209ENST00000620197 BTN2A3PQ96KV6 586 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms