RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 FAIMQ9NVQ4 179 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 SPG21Q9NZD8 308 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 SELENONQ9NZV5 590 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 SUN2Q9UH99 717 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 TSR3Q9UJK0 312 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 AAR2Q9Y312 384 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 PDE4DIPQ5VU43 2346 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 A0A087X1B8 175 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 C1orf232A0A0U1RR37 186 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 A0A1W2PQH9 124 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 HHLA1C9JL84 531 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 INPP4BO15327 924 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ANXA9O76027 345 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 GSRP00390 522 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF12P17014 697 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ERCC2P18074 760 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 GNALP38405 381 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 WDR5P61964 334 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 TXNL4AP83876 142 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 OLIG2Q13516 323 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 RGS21Q2M5E4 152 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 AASDHQ4L235 1098 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 SNAP47Q5SQN1 464 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF470Q6ECI4 717 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 RSPO2Q6UXX9 243 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 CYP4V2Q6ZWL3 525 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 KDELC2Q7Z4H8 507 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 MIB1Q86YT6 1006 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 CHERPQ8IWX8 916 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 C7orf61Q8IZ16 206 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 DQX1Q8TE96 717 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 BCL7CQ8WUZ0 217 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 BADQ92934 168 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 C12orf43Q96C57 262 aaKnown RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 NXNL1Q96CM4 212 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ISOC1Q96CN7 298 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ZNF597Q96LX8 424 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 FCRL3Q96P31 734 aaPredicted RBP6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 C1orf50Q9BV19 199 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 ADI1Q9BV57 179 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 MCOLN1Q9GZU1 580 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 TKTL2Q9H0I9 626 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 RMI1Q9H9A7 625 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 SNX5Q9Y5X3 404 aa6.97□□□□□ -1.29
SRGAP3-213ENST00000618999 KANSL1LA0AUZ9 987 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 MTMR11A4FU01 709 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 C16orf96A6NNT2 1141 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 TMEM233B4DJY2 109 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 PRRG1O14668 218 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 KIAA0355O15063 1070 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 NPHS1O60500 1241 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 BMP10O95393 424 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 FYNP06241 537 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 HMBSP08397 361 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 PTPN3P26045 913 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 ARRB2P32121 409 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 ADRA1BP35368 520 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 MAPK10P53779 464 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 CTBP1Q13363 440 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 CYP51A1Q16850 503 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 RAB41Q5JT25 222 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 TAC4Q86UU9 113 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC22A9Q8IVM8 553 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 CLEC4FQ8N1N0 589 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 BBS5Q8N3I7 341 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 CALML6Q8TD86 181 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 AUTS2Q8WXX7 1259 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 CENPIQ92674 756 aaPredicted RBP6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 SLC2A13Q96QE2 648 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 GPR22Q99680 433 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 TUBA8Q9NY65 449 aaPredicted RBP6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 HSFX1Q9UBD0 423 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 PTBP2Q9UKA9 531 aaKnown RBP6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 ITGB1BP2Q9UKP3 347 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 FZD10Q9ULW2 581 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 COQ6Q9Y2Z9 468 aa6.96□□□□□ -1.29
SRGAP3-213ENST00000618999 ADAM12O43184 909 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 MSI1O43347 362 aaKnown RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 DLX3O60479 287 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 SNAP91O60641 907 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 ZBTB11O95625 1053 aaPredicted RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 CHEK2O96017 543 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 LAG3P18627 525 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 CDH3P22223 829 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 MASP1P48740 699 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 EFEMP1Q12805 493 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 TAF10Q12962 218 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 PPIGQ13427 754 aaKnown RBP eCLIP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 NR1D2Q14995 579 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 PCID2Q5JVF3 399 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 LYPD8Q6UX82 237 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 MON1AQ86VX9 555 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 FIBCD1Q8N539 461 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 ATPAF2Q8N5M1 289 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 TMCO5AQ8N6Q1 288 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 GOLM1Q8NBJ4 401 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 OR6P1Q8NGX9 317 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 CANT1Q8WVQ1 401 aa6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 ZNF512Q96ME7 567 aaPredicted RBP6.96□□□□□ -1.3
SRGAP3-213ENST00000618999 PKMYT1Q99640 499 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms