RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 GPR63Q9BZJ6 419 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 TMEM168Q9H0V1 697 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 LRRC40Q9H9A6 602 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 RMI1Q9H9A7 625 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 SMOXQ9NWM0 555 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 PYCARDQ9ULZ3 195 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 SUFUQ9UMX1 484 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 SNX12Q9UMY4 172 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 MSRB2Q9Y3D2 182 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 NEU2Q9Y3R4 380 aa8.19□□□□□ -1.1
NEK3-209ENST00000618856 DMXL2Q8TDJ6 3036 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 ACACBO00763 2458 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 MROH6A6NGR9 719 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 F5H423 210 aaPredicted RBP8.18□□□□□ -1.1
NEK3-209ENST00000618856 H7C0S8 307 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 FANCGO15287 622 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 FFAR2O15552 330 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 KIF5CO60282 957 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 NUAK1O60285 661 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 CEP104O60308 925 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 NOBOXO60393 691 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 RFPL3O75679 317 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 PTMAP06454 111 aaKnown RBP8.18□□□□□ -1.1
NEK3-209ENST00000618856 PNLIPP16233 465 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 CA5AP35218 305 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 RPL22P35268 128 aaKnown RBP8.18□□□□□ -1.1
NEK3-209ENST00000618856 FDFT1P37268 417 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 ADCY8P40145 1251 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 MAGEA6P43360 314 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 CLCNKAP51800 687 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 ZNF140P52738 457 aaPredicted RBP8.18□□□□□ -1.1
NEK3-209ENST00000618856 XIAPP98170 497 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 PDE1BQ01064 536 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 CAMK2BQ13554 666 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 LRP8Q14114 963 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 NR1D2Q14995 579 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 LONRF2Q1L5Z9 754 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 DEFB133Q30KQ1 61 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 ATP13A5Q4VNC0 1218 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 ZNF569Q5MCW4 686 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 PAPD7Q5XG87 772 aaKnown RBP8.18□□□□□ -1.1
NEK3-209ENST00000618856 TTC27Q6P3X3 843 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 C4orf22Q6V702 233 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 CCNI2Q6ZMN8 369 aaPredicted RBP8.18□□□□□ -1.1
NEK3-209ENST00000618856 GLT6D1Q7Z4J2 308 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 ADGRG6Q86SQ4 1221 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 TMPRSS12Q86WS5 348 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 GKN2Q86XP6 184 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 CHCHD4Q8N4Q1 142 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 SLC25A41Q8N5S1 370 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
NEK3-209ENST00000618856 PNPLA1Q8N8W4 532 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 CCL4L1Q8NHW4 92 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 BLOC1S5Q8TDH9 187 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 COG1Q8WTW3 980 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 GLYATL1Q969I3 302 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 OSBPL9Q96SU4 736 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 SCNM1Q9BWG6 230 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 CARS2Q9HA77 564 aaKnown RBP8.18□□□□□ -1.1
NEK3-209ENST00000618856 ETNK1Q9HBU6 452 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 TRIM39Q9HCM9 518 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 CYP4F12Q9HCS2 524 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 EIF2B3Q9NR50 452 aaKnown RBP8.18□□□□□ -1.1
NEK3-209ENST00000618856 PAK5Q9P286 719 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 ANGPTL2Q9UKU9 493 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 ZNF148Q9UQR1 794 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 TMEM98Q9Y2Y6 226 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 PTPRBP23467 1997 aa8.18□□□□□ -1.1
NEK3-209ENST00000618856 PLXNB3Q9ULL4 1909 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 TDRD6O60522 2096 aaKnown RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 GLYATL1P3A0A0U1RQE8 302 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 A6NCN8 305 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 GOLGA6CA6NDK9 693 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 GOLGA6BA6NDN3 693 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 C2orf81A6NN90 581 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 HYAL3O43820 417 aaPredicted RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 VEGFDO43915 354 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 USP12O75317 370 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 CRTAMO95727 393 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 ANXA6P08133 673 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 ZSCAN5DPP0CG00 497 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 GOLGA6DP0CG33 693 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 CTSEP14091 401 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 ETS1P14921 441 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 ZNF8P17098 575 aaPredicted RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 LPOP22079 712 aaPredicted RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 MSNP26038 577 aaKnown RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 SPAM1P38567 509 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 DUSP3P51452 185 aaPredicted RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 E2F1Q01094 437 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 INSM1Q01101 510 aaPredicted RBP8.17□□□□□ -1.1
NEK3-209ENST00000618856 CTBSQ01459 385 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 ACVR1Q04771 509 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 FOXC1Q12948 553 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 SNX1Q13596 522 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 PEX6Q13608 980 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 SPARCL1Q14515 664 aa8.17□□□□□ -1.1
NEK3-209ENST00000618856 HLTFQ14527 1009 aaKnown RBP eCLIP8.17□□□□□ -1.1
NEK3-209ENST00000618856 PTPRCAPQ14761 206 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms