RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 ZNF252P-AS1Q0IIN9 211 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 SLAMF1Q13291 335 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 ZNF460Q14592 562 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 Q5BKY6 102 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 ANKRD34AQ69YU3 496 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 PPHLN1Q8NEY8 458 aaKnown RBP12.22□□□□□ -0.45
MATR3-227ENST00000618441 RXFP2Q8WXD0 754 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 ZBTB20Q9HC78 741 aaPredicted RBP12.22□□□□□ -0.45
MATR3-227ENST00000618441 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
MATR3-227ENST00000618441 COX16Q9P0S2 106 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 WRAP73Q9P2S5 460 aaPredicted RBP12.22□□□□□ -0.45
MATR3-227ENST00000618441 ERVK-18Q9QC07 812 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 DUOX1Q9NRD9 1551 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 DLGAP1O14490 977 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 TRIM24O15164 1050 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 GSRP00390 522 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 RPL17P18621 184 aaKnown RBP12.22□□□□□ -0.45
MATR3-227ENST00000618441 CFL1P23528 166 aaKnown RBP12.22□□□□□ -0.45
MATR3-227ENST00000618441 PKLRP30613 574 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 EVI2BP34910 448 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 BST2Q10589 180 aaKnown RBP12.22□□□□□ -0.45
MATR3-227ENST00000618441 PDK2Q15119 407 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 XAF1Q6GPH4 301 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 CDC42EP5Q6NZY7 148 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 PAMR1Q6UXH9 720 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 KCTD20Q7Z5Y7 419 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 RYBPQ8N488 228 aaPredicted RBP12.22□□□□□ -0.45
MATR3-227ENST00000618441 CPA6Q8N4T0 437 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 DNAJB8Q8NHS0 232 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 VPS39Q96JC1 886 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 TRNT1Q96Q11 434 aaKnown RBP12.22□□□□□ -0.45
MATR3-227ENST00000618441 AGAP2Q99490 1192 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 SCPEP1Q9HB40 452 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 SYTL2Q9HCH5 934 aa12.22□□□□□ -0.45
MATR3-227ENST00000618441 ENPP3O14638 875 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 PRPSAP2O60256 369 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 C16orf54Q6UWD8 224 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 ERO1BQ86YB8 467 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 SULF1Q8IWU6 871 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 NLGN4XQ8N0W4 816 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 TP53INP1Q96A56 240 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 PHF21AQ96BD5 680 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 CD274Q9NZQ7 290 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 LUZP4Q9P127 313 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 AKAP11Q9UKA4 1901 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 MYH9P35579 1960 aaKnown RBP12.21□□□□□ -0.45
MATR3-227ENST00000618441 TJP1Q07157 1748 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 SLC12A8A0AV02 714 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 SLC22A1O15245 554 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 IL7P13232 177 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 ABATP80404 500 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 GABPAQ06546 454 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 SPIRE1Q08AE8 756 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 TP53BP2Q13625 1128 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 KCNJ11Q14654 390 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 INSCQ1MX18 579 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 ZNF404Q494X3 552 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 SH3PXD2AQ5TCZ1 1133 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 GARNL3Q5VVW2 1013 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 TXNDC11Q6PKC3 985 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 ARSKQ6UWY0 536 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 CAMKK1Q8N5S9 505 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 ZNF540Q8NDQ6 660 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 ANGPTL6Q8NI99 470 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 FBXO30Q8TB52 745 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 PNPT1Q8TCS8 783 aaKnown RBP12.21□□□□□ -0.45
MATR3-227ENST00000618441 TRIB2Q92519 343 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 PRMT6Q96LA8 375 aaPredicted RBP12.21□□□□□ -0.45
MATR3-227ENST00000618441 KATNAL1Q9BW62 490 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 COA1Q9GZY4 146 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 ALG2Q9H553 416 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 PNPLA8Q9NP80 782 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 INVSQ9Y283 1065 aa12.21□□□□□ -0.45
MATR3-227ENST00000618441 CHADO15335 359 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 LRCH4O75427 683 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 PRKCHP24723 683 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 LAPTM4AQ15012 233 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 FSCN1Q16658 493 aaKnown RBP12.21□□□□□ -0.46
MATR3-227ENST00000618441 C5orf22Q49AR2 442 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 STRADAQ7RTN6 431 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 SIMC1Q8NDZ2 872 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 CLSTN3Q9BQT9 956 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 SLA2Q9H6Q3 261 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 ZNF408Q9H9D4 720 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 CPNE7Q9UBL6 633 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 TSR3Q9UJK0 312 aaKnown RBP12.21□□□□□ -0.46
MATR3-227ENST00000618441 PCDHGB7Q9Y5F8 929 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 A0A0G2JMP0 313 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 PITPNM1O00562 1244 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 OR2B3O76000 313 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 CHRNA1P02708 482 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 TGM2P21980 687 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 CRY2Q49AN0 593 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 RABL3Q5HYI8 236 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 C6orf141Q5SZD1 244 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 FAM102AQ5T9C2 384 aaPredicted RBP12.21□□□□□ -0.46
MATR3-227ENST00000618441 CLEC6AQ6EIG7 209 aa12.21□□□□□ -0.46
MATR3-227ENST00000618441 CFAP77Q6ZQR2 320 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms