RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 Q9Y3F1 56 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 YIPF1Q9Y548 306 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 TTC27Q6P3X3 843 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 FAM180AQ6UWF9 173 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 FBXW8Q8N3Y1 598 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 KLK6Q92876 244 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 CXorf56Q9H5V9 222 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 MAT2BQ9NZL9 334 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 FZD10Q9ULW2 581 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 PLLPQ9Y342 182 aa18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 ATXN2Q99700 1313 aaKnown RBP18.44■□□□□ 0.54
AC008878.3-201ENST00000617428 TRIM38O00635 465 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 SLC28A2O43868 658 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 CCNDBP1O95273 360 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 HSPA7P48741 367 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 SLC7A2P52569 658 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 CDC42P60953 191 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 GRSF1Q12849 480 aaKnown RBP eCLIP18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 RNF43Q68DV7 783 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 LRRC57Q8N9N7 239 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 C6orf62Q9GZU0 229 aaPredicted RBP18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 IPPKQ9H8X2 491 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 DTLQ9NZJ0 730 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 GGA2Q9UJY4 613 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 ASB3Q9Y575 518 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 TRIM24O15164 1050 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 BCL10O95999 233 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 COL6A2P12110 1019 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 ITGA2P17301 1181 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 USP46P62068 366 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 TRIM71Q2Q1W2 868 aaKnown RBP18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 CCNYL2Q5T2Q4 361 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 C8orf59Q8N0T1 100 aaPredicted RBP18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 SMYD1Q8NB12 490 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 FAXDC2Q96IV6 333 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 IL12RB2Q99665 862 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 SH3GL3Q99963 347 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 DGCR6LQ9BY27 220 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 POLR1BQ9H9Y6 1135 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 EQTNQ9NQ60 294 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 IRAK2O43187 625 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 OR10H3O60404 316 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 ALG11Q2TAA5 492 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 TSTD2Q5T7W7 516 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 CLVS1Q8IUQ0 354 aaPredicted RBP18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 TCAIMQ8N3R3 496 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 ZMAT2Q96NC0 199 aaKnown RBP18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 STMN3Q9NZ72 180 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 COLEC10Q9Y6Z7 277 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 ZNF536O15090 1300 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 EDF1O60869 148 aaKnown RBP18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 CDH3P22223 829 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 IFNLR1Q8IU57 520 aaPredicted RBP18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 TERB1Q8NA31 727 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 MCCC1Q96RQ3 725 aaPredicted RBP18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 SLITRK2Q9H156 845 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 PALMDQ9NP74 551 aa18.43■□□□□ 0.54
AC008878.3-201ENST00000617428 KRT33AO76009 404 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 GOT2P00505 430 aaKnown RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 NMBRP28336 390 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 TNK2Q07912 1038 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 TXNDC8Q6A555 127 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 HDHD2Q9H0R4 259 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 GPN3Q9UHW5 284 aaPredicted RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 ABHD14A-ACY1A0A1B0GW23 586 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 PPEF2O14830 753 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 LCA5LO95447 670 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 CCNYL3P0C7X3 344 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 TTC23Q5W5X9 447 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 TMEM220Q6QAJ8 160 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 HID1Q8IV36 788 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 SNRNP27Q8WVK2 155 aaKnown RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 ZNF607Q96SK3 696 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 S100A13Q99584 98 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 LRTM1Q9HBL6 345 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 SAMHD1Q9Y3Z3 626 aaKnown RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 ERN1O75460 977 aaKnown RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 CRHR1P34998 444 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 SMIM11AP58511 58 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 PURAQ00577 322 aaKnown RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 GRB14Q14449 540 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 MINDY4Q4G0A6 757 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 KIAA0408Q6ZU52 694 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 DHDDSQ86SQ9 333 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 LCN9Q8WX39 176 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 FNDC11Q9BVV2 318 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 PAPOLBQ9NRJ5 636 aaKnown RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 H3BNH8 94 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 TRAFD1O14545 582 aaPredicted RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 TRAF7Q6Q0C0 670 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 DEF8Q6ZN54 512 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 FUKQ8N0W3 1084 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 IQCKQ8N0W5 287 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 BPIFB6Q8NFQ5 453 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 OR4A15Q8NGL6 344 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 SUSD3Q96L08 255 aa18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 ZNF184Q99676 751 aaPredicted RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 NOL11Q9H8H0 719 aaKnown RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 POLMQ9NP87 494 aaPredicted RBP18.42■□□□□ 0.54
AC008878.3-201ENST00000617428 MIOSQ9NXC5 875 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms