RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 MRPL9Q9BYD2 267 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 WDR41Q9HAD4 459 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 TNFRSF12AQ9NP84 129 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 OXSMQ9NWU1 459 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 VWA7Q9Y334 891 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 HEATR9A2RTY3 570 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 K7EPI3 171 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 OR1I1O60431 355 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 SERPINF2P08697 491 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 ESRRGP62508 458 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 TSTD2Q5T7W7 516 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 TRAF7Q6Q0C0 670 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 COX4I2Q96KJ9 171 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 KCNA7Q96RP8 456 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 GPR22Q99680 433 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 SLC39A3Q9BRY0 314 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 POLR1EQ9GZS1 481 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 SEMA4BQ9NPR2 832 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 PABPN1LA6NDY0 278 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 TMEM247A6NEH6 219 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 RHOBTB1O94844 696 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 GLP2RO95838 553 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 IGLV3-25P01717 112 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 ZNF23P17027 643 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 MZF1P28698 734 aaPredicted RBP14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 ARCN1P48444 511 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 C21orf59P57076 290 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 CYP4F8P98187 520 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 UGP2Q16851 508 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 GK5Q6ZS86 529 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 ANKS3Q6ZW76 656 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 MRPS31Q92665 395 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 SLC29A1Q99808 456 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 IGFLR1Q9H665 355 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 AFF4Q9UHB7 1163 aaKnown RBP14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 TIMM22Q9Y584 194 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 PCDHB12Q9Y5F1 795 aa14.42□□□□□ -0.1
SHROOM1-208ENST00000617339 A0A1W2PPW3 197 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 SAC3D1A6NKF1 404 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 TPST1O60507 370 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 H6PDO95479 791 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 C1RP00736 705 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 ALPIP09923 528 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 SBK3P0C264 359 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 RALGDSQ12967 914 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 BNIP3Q12983 259 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 GPR17Q13304 367 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 C16orf89Q6UX73 402 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 NSUN5Q96P11 429 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 TNKS2Q9H2K2 1166 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 DNAJC28Q9NX36 388 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 DNMT3LQ9UJW3 386 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 VNN2O95498 520 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 CLIC3O95833 236 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 ZNF24P17028 368 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 ME2P23368 584 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 GABRR2P28476 465 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 DPP6P42658 865 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 GJA8P48165 433 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 NUP107P57740 925 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 TGFBIQ15582 683 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 HECTD3Q5T447 861 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 LIPMQ5VYY2 423 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 LRRC43Q8N309 656 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 OR13J1Q8NGT2 312 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 NOL11Q9H8H0 719 aaKnown RBP14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 SPO11Q9Y5K1 396 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 FUOMA2VDF0 154 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 UBXN8O00124 270 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 TBL1XO60907 577 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 FUCA1P04066 466 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 GNA12Q03113 381 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 SEMA3AQ14563 771 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 TRIP4Q15650 581 aaPredicted RBP14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 KIF19Q2TAC6 998 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 ARMC12Q5T9G4 340 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 GLT6D1Q7Z4J2 308 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 IFNEQ86WN2 208 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 DDHD1Q8NEL9 900 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 ISOC1Q96CN7 298 aa14.41□□□□□ -0.1
SHROOM1-208ENST00000617339 ADAM23O75077 832 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 SERPINB7O75635 380 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 CES1P23141 567 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 EPHB3P54753 998 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 RPL26P61254 145 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 CREB5Q02930 508 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 ZNF423Q2M1K9 1284 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 CROCCP3Q8IVE0 287 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 PXYLP1Q8TE99 480 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 TRPC4APQ8TEL6 797 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 SLC39A13Q96H72 371 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 TSGA13Q96PP4 275 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 MRPL46Q9H2W6 279 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 URB1O60287 2271 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 SUPT3HB4E1H0 165 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 CD3EAPO15446 510 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 NDUFS3O75489 264 aa14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 SRP72O76094 671 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-208ENST00000617339 GUCA1CO95843 209 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms