RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 ZNF678Q5SXM1 525 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 FAM171A1Q5VUB5 890 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 GPR107Q5VW38 600 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 FBXO46Q6PJ61 603 aaPredicted RBP11.17□□□□□ -0.62
ATF3-211ENST00000613954 SPPL2CQ8IUH8 684 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 SLC15A3Q8IY34 581 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 SPATA22Q8NHS9 363 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 ITPKCQ96DU7 683 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 FUBP3Q96I24 572 aaKnown RBP eCLIP11.17□□□□□ -0.62
ATF3-211ENST00000613954 IL12RB2Q99665 862 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 TRIM54Q9BYV2 358 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 TKTL2Q9H0I9 626 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 POLR1BQ9H9Y6 1135 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 INTS10Q9NVR2 710 aaKnown RBP11.17□□□□□ -0.62
ATF3-211ENST00000613954 MARCH5Q9NX47 278 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 ITGB1BP2Q9UKP3 347 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 ATP11BQ9Y2G3 1177 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 SLC30A1Q9Y6M5 507 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 TTC3P53804 2025 aa11.17□□□□□ -0.62
ATF3-211ENST00000613954 PTPRDP23468 1912 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 TYW5A2RUC4 315 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 OR6C75A6NL08 312 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 SUPT3HO75486 399 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 SUPT7LO94864 414 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 MT-CYBP00156 380 aaPredicted RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 FGF4P08620 206 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 INHBBP09529 407 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 GFAPP14136 432 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 KCNA5P22460 613 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 VARSP26640 1264 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 HTR7P34969 479 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 RFC2P35250 354 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 GRIK1P39086 918 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 HLCSP50747 726 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 CTXN3Q4LDR2 81 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 CCNYL2Q5T2Q4 361 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 GRAMD4Q6IC98 578 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 ZNF280DQ6N043 979 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 CNKSR3Q6P9H4 555 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 C16orf87Q6PH81 154 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 DCDC5Q6ZRR9 648 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 KCTD8Q6ZWB6 473 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 RETREG3Q86VR2 466 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 RNF135Q8IUD6 432 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 CMTR2Q8IYT2 770 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 TBC1D21Q8IYX1 336 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 ADGRG5Q8IZF4 528 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 ARMC5Q96C12 935 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 PHF21BQ96EK2 531 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 NRBF2Q96F24 287 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 CELF6Q96J87 481 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 SLC39A3Q9BRY0 314 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 C1orf50Q9BV19 199 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 GPR62Q9BZJ7 368 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 AKTIPQ9H8T0 292 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 TNFRSF12AQ9NP84 129 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 TMEM39AQ9NV64 488 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 MAP10Q9P2G4 905 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 SEPT3Q9UH03 358 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 OAZ3Q9UMX2 235 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 COQ6Q9Y2Z9 468 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 PATJQ8NI35 1801 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 NUP205Q92621 2012 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 SOBPA7XYQ1 873 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 H0YAE9 185 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 DFFAO00273 331 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 NR5A2O00482 541 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 ARPC2O15144 300 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 MATN3O15232 486 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 ACOX3O15254 700 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 VPS4BO75351 444 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 CPNE6O95741 557 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 GALTP07902 379 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 ALDOCP09972 364 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 CCNA2P20248 432 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 RPS9P46781 194 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 HERVK_113P63132 956 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 TUBA3CQ13748 450 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 PITRM1Q5JRX3 1037 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 AARS2Q5JTZ9 985 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 RBM20Q5T481 1227 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 TIGD7Q6NT04 549 aaPredicted RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 FUT10Q6P4F1 479 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 BEND5Q7L4P6 421 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 PTRH1Q86Y79 214 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 DDIASQ8IXT1 998 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 PAPD5Q8NDF8 572 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 TRUB1Q8WWH5 349 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 HDAC10Q969S8 669 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 OLFM1Q99784 485 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 ERVK-6Q9BXR3 956 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 TDRD1Q9BXT4 1180 aaKnown RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 ABI2Q9NYB9 513 aaPredicted RBP11.16□□□□□ -0.62
ATF3-211ENST00000613954 SLC2A6Q9UGQ3 507 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 B3GNT3Q9Y2A9 372 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 PCDHB5Q9Y5E4 795 aa11.16□□□□□ -0.62
ATF3-211ENST00000613954 COL4A4P53420 1690 aaPredicted RBP11.15□□□□□ -0.62
ATF3-211ENST00000613954 TET1Q8NFU7 2136 aa11.15□□□□□ -0.62
ATF3-211ENST00000613954 A0A1W2PPW3 197 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms