RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.55■■□□□ 1.2
FAM228B-208ENST00000613899 AKAP7Q9P0M2 348 aaPredicted RBP22.55■■□□□ 1.2
FAM228B-208ENST00000613899 PISDQ9UG56 409 aa22.55■■□□□ 1.2
FAM228B-208ENST00000613899 PLEKHM1Q9Y4G2 1056 aa22.55■■□□□ 1.2
FAM228B-208ENST00000613899 SMG1Q96Q15 3661 aaKnown RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 FADS2P1A8MWK0 482 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 ATXN7O15265 892 aaPredicted RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 MTSS1O43312 755 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 B4GAT1O43505 415 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 CST8O60676 142 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 DNAJC6O75061 913 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 ATP1A1P05023 1023 aaKnown RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 HGFP14210 728 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 PTPN3P26045 913 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 CYLC1P35663 651 aaPredicted RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 DCDC1P59894 354 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 COL9A2Q14055 689 aaPredicted RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 AMZ1Q400G9 498 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 KAZNQ674X7 775 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 CCDC70Q6NSX1 233 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 SPOCD1Q6ZMY3 1216 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 KDELC2Q7Z4H8 507 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 LSM14AQ8ND56 463 aaKnown RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 SRPK1Q96SB4 655 aaKnown RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 ZSCAN5AQ9BUG6 496 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 RDH14Q9HBH5 336 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 GLOD4Q9HC38 313 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 CPNE5Q9HCH3 593 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 NFKBIL1Q9UBC1 381 aaPredicted RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 ZNHIT2Q9UHR6 403 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 ACSL6Q9UKU0 697 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 CNOT6Q9ULM6 557 aaKnown RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 SSUH2Q9Y2M2 353 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 ZNF711Q9Y462 761 aa22.54■■□□□ 1.2
FAM228B-208ENST00000613899 OAS3Q9Y6K5 1087 aaKnown RBP22.54■■□□□ 1.2
FAM228B-208ENST00000613899 TK2O00142 265 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 SLC5A2P31639 672 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 FASLGP48023 281 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 ZNF569Q5MCW4 686 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 C11orf63Q6NUN7 778 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 B4GALNT4Q76KP1 1039 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 TMPRSS9Q7Z410 1059 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 KATNAL2Q8IYT4 538 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 P3H4Q92791 437 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 RBM41Q96IZ5 413 aaKnown RBP22.53■■□□□ 1.2
FAM228B-208ENST00000613899 TEKT5Q96M29 485 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 SPATA16Q9BXB7 569 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 GOLPH3Q9H4A6 298 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 PCDHA13Q9Y5I0 950 aa22.53■■□□□ 1.2
FAM228B-208ENST00000613899 NVLO15381 856 aaKnown RBP22.52■■□□□ 1.2
FAM228B-208ENST00000613899 ZRANB2O95218 330 aaKnown RBP eCLIP22.52■■□□□ 1.2
FAM228B-208ENST00000613899 NDST3O95803 873 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 MT-CYBP00156 380 aaPredicted RBP22.52■■□□□ 1.2
FAM228B-208ENST00000613899 SLC4A1P02730 911 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 PECAM1P16284 738 aaPredicted RBP22.52■■□□□ 1.2
FAM228B-208ENST00000613899 VAC14Q08AM6 782 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 ARHGAP40Q5TG30 622 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 PDPK2PQ6A1A2 396 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 CHST15Q7LFX5 561 aaPredicted RBP22.52■■□□□ 1.2
FAM228B-208ENST00000613899 TMC3Q7Z5M5 1100 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 CCDC50Q8IVM0 306 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 SFRP1Q8N474 314 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 SPATA22Q8NHS9 363 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 EID2BQ96D98 161 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 DPYSL5Q9BPU6 564 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 NUDT22Q9BRQ3 303 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 GPR63Q9BZJ6 419 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 CARD9Q9H257 536 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 SEMA6CQ9H3T2 930 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 STN1Q9H668 368 aaKnown RBP22.52■■□□□ 1.2
FAM228B-208ENST00000613899 SAE1Q9UBE0 346 aaPredicted RBP22.52■■□□□ 1.2
FAM228B-208ENST00000613899 SHOC2Q9UQ13 582 aa22.52■■□□□ 1.2
FAM228B-208ENST00000613899 hCG_1818297A0A087WSY0 165 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 HGSO14964 777 aaPredicted RBP22.51■■□□□ 1.19
FAM228B-208ENST00000613899 PPM1DO15297 605 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 PIRTP0C851 137 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 SLC2A4P14672 509 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 ITIH1P19827 911 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 TNNT3P45378 269 aaPredicted RBP22.51■■□□□ 1.19
FAM228B-208ENST00000613899 GPLD1P80108 840 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 RHDQ02161 417 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 CLN3Q13286 438 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 FAM182AQ5T1J6 154 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 ALS2CLQ60I27 953 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 RCOR2Q8IZ40 523 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 TRAM1L1Q8N609 369 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 SLC37A2Q8TED4 501 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 SNRNP27Q8WVK2 155 aaKnown RBP22.51■■□□□ 1.19
FAM228B-208ENST00000613899 SLC39A7Q92504 469 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 VAT1Q99536 393 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 HERPUD2Q9BSE4 406 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 KCNK4Q9NYG8 393 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 AHCTF1Q8WYP5 2266 aa22.51■■□□□ 1.19
FAM228B-208ENST00000613899 IGHV1OR21-1A0A087WYE8 117 aa22.5■■□□□ 1.19
FAM228B-208ENST00000613899 GPR89AB7ZAQ6 455 aa22.5■■□□□ 1.19
FAM228B-208ENST00000613899 ERVH48-1M5A8F1 160 aa22.5■■□□□ 1.19
FAM228B-208ENST00000613899 PMPCBO75439 489 aa22.5■■□□□ 1.19
FAM228B-208ENST00000613899 GPR89BP0CG08 455 aa22.5■■□□□ 1.19
FAM228B-208ENST00000613899 CD1CP29017 333 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms