RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ZNF765Q7L2R6 523 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 CHST15Q7LFX5 561 aaPredicted RBP23.21■■□□□ 1.31
MMP28-203ENST00000612672 POLNQ7Z5Q5 900 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 LZTR1Q8N653 840 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 ZPBPQ9BS86 351 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 EFHD1Q9BUP0 239 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 NT5MQ9NPB1 228 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 ZNHIT2Q9UHR6 403 aa23.21■■□□□ 1.31
MMP28-203ENST00000612672 MN1Q10571 1320 aaPredicted RBP23.21■■□□□ 1.31
MMP28-203ENST00000612672 CELSR2Q9HCU4 2923 aa23.2■■□□□ 1.3
MMP28-203ENST00000612672 A0A0J9YYE9 177 aa23.2■■□□□ 1.3
MMP28-203ENST00000612672 POLR1CO15160 346 aaPredicted RBP23.2■■□□□ 1.3
MMP28-203ENST00000612672 TRBC1P01850 177 aa23.2■■□□□ 1.3
MMP28-203ENST00000612672 RNF224P0DH78 156 aa23.2■■□□□ 1.3
MMP28-203ENST00000612672 MMP13P45452 471 aa23.2■■□□□ 1.3
MMP28-203ENST00000612672 DPYSL2Q16555 572 aa23.2■■□□□ 1.3
MMP28-203ENST00000612672 CT47A1Q5JQC4 288 aaPredicted RBP23.2■■□□□ 1.3
MMP28-203ENST00000612672 CSPG4P5Q96PW8 444 aa23.2■■□□□ 1.3
MMP28-203ENST00000612672 ERGIC2Q96RQ1 377 aa23.2■■□□□ 1.3
MMP28-203ENST00000612672 LIMA1Q9UHB6 759 aaKnown RBP23.2■■□□□ 1.3
MMP28-203ENST00000612672 CROTQ9UKG9 612 aa23.2■■□□□ 1.3
MMP28-203ENST00000612672 FADS2P1A8MWK0 482 aa23.19■■□□□ 1.3
MMP28-203ENST00000612672 ASMTLO95671 621 aa23.19■■□□□ 1.3
MMP28-203ENST00000612672 ACP5P13686 325 aa23.19■■□□□ 1.3
MMP28-203ENST00000612672 DESP17661 470 aa23.19■■□□□ 1.3
MMP28-203ENST00000612672 SH3BP2P78314 561 aa23.19■■□□□ 1.3
MMP28-203ENST00000612672 PSTKQ8IV42 348 aaKnown RBP23.19■■□□□ 1.3
MMP28-203ENST00000612672 ATPAF2Q8N5M1 289 aa23.19■■□□□ 1.3
MMP28-203ENST00000612672 LRBAP50851 2863 aa23.19■■□□□ 1.3
MMP28-203ENST00000612672 H3BRJ5 948 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 SNX2O60749 519 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 CLDN7O95471 211 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 FERP16591 822 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 DLSTP36957 453 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 EPHA4P54764 986 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 MC1RQ01726 317 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 UBXN1Q04323 297 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 MAP7Q14244 749 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 ERV3-1Q14264 604 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 E4F1Q66K89 784 aaPredicted RBP23.18■■□□□ 1.3
MMP28-203ENST00000612672 TMCO3Q6UWJ1 677 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 NLRP8Q86W28 1048 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.18■■□□□ 1.3
MMP28-203ENST00000612672 ESX1Q8N693 406 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 TEX26Q8N6G2 289 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 GALNT6Q8NCL4 622 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 EXD1Q8NHP7 514 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 HSD3B7Q9H2F3 369 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 TRIT1Q9H3H1 467 aaKnown RBP23.18■■□□□ 1.3
MMP28-203ENST00000612672 ZWILCHQ9H900 591 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 SCHIP1Q9P0W5 487 aaPredicted RBP23.18■■□□□ 1.3
MMP28-203ENST00000612672 KCTD3Q9Y597 815 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 MED13Q9UHV7 2174 aa23.18■■□□□ 1.3
MMP28-203ENST00000612672 RNF8O76064 485 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 PRLP01236 227 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 ANKRD34CP0C6C1 535 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 NFKBIAP25963 317 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 UBE2IP63279 158 aaKnown RBP23.17■■□□□ 1.3
MMP28-203ENST00000612672 DSC2Q02487 901 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 RALGPS1Q5JS13 557 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 MARC1Q5VT66 337 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 TCTN3Q6NUS6 607 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 HSPH1Q92598 858 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 ULBP3Q9BZM4 244 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 ARFGAP3Q9NP61 516 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 PRDM8Q9NQV8 689 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 VPS18Q9P253 973 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 CPNE7Q9UBL6 633 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 CHKBQ9Y259 395 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 SLC30A1Q9Y6M5 507 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 CSMD1Q96PZ7 3565 aa23.17■■□□□ 1.3
MMP28-203ENST00000612672 HIVEP3Q5T1R4 2406 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 DNAJB5O75953 348 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 C9P02748 559 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 TPM2P07951 284 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 F3P13726 295 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 MAN1A1P33908 653 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 ZNF135P52742 658 aaPredicted RBP23.16■■□□□ 1.3
MMP28-203ENST00000612672 FOXM1Q08050 763 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 SEPT6Q14141 434 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 ZNF648Q5T619 568 aaPredicted RBP23.16■■□□□ 1.3
MMP28-203ENST00000612672 C9orf72Q96LT7 481 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 LRRC4CQ9HCJ2 640 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.16■■□□□ 1.3
MMP28-203ENST00000612672 CNOT8Q9UFF9 292 aaKnown RBP23.16■■□□□ 1.3
MMP28-203ENST00000612672 TLK1Q9UKI8 766 aa23.16■■□□□ 1.3
MMP28-203ENST00000612672 RARAP10276 462 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 ATP1A3P13637 1013 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 ZNF30P17039 623 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 GNLYP22749 145 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 LEPRP48357 1165 aaKnown RBP23.15■■□□□ 1.3
MMP28-203ENST00000612672 SEPHS1P49903 392 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 CDH6P55285 790 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 HENMT1Q5T8I9 393 aaKnown RBP23.15■■□□□ 1.3
MMP28-203ENST00000612672 ASB18Q6ZVZ8 466 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 LYSMD3Q7Z3D4 306 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 ZNF571Q7Z3V5 609 aaPredicted RBP23.15■■□□□ 1.3
MMP28-203ENST00000612672 SLC9B2Q86UD5 537 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 CCDC13Q8IYE1 715 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 TEX19Q8NA77 164 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms