RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	CD160	O95971	181 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SCNN1B	P51168	640 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	POU6F1	Q14863	301 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	ANKRD20A4	Q4UJ75	823 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	PCID2	Q5JVF3	399 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	FAM46C	Q5VWP2	391 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CYS1	Q717R9	158 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	TMEM135	Q86UB9	458 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	LRRC6	Q86X45	466 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	PROSER1	Q86XN7	944 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SRRM1	Q8IYB3	904 aa	Known RBP	13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	PPHLN1	Q8NEY8	458 aa	Known RBP	13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	MDM1	Q8TC05	714 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	FRS2	Q8WU20	508 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	IFT43	Q96FT9	208 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	ARNT2	Q9HBZ2	717 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SCUBE2	Q9NQ36	999 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CHRAC1	Q9NRG0	131 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SARDH	Q9UL12	918 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	PKD1L2	Q7Z442	2459 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	FAM149A	A5PLN7	773 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	INSIG1	O15503	277 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	NMBR	P28336	390 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	GABPB1	Q06547	395 aa	Predicted RBP	13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CNTN1	Q12860	1018 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SLC1A5	Q15758	541 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SMAD1	Q15797	465 aa	Known RBP	13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	INO80D	Q53TQ3	878 aa	Predicted RBP	13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	RETSAT	Q6NUM9	610 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	TMPRSS7	Q7RTY8	843 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	TRABD2A	Q86V40	505 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SLC26A11	Q86WA9	606 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	PIP4K2C	Q8TBX8	421 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CDKL2	Q92772	493 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	MFSD3	Q96ES6	412 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CERS2	Q96G23	380 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	FEM1C	Q96JP0	617 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	NUDCD1	Q96RS6	583 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	KIFC1	Q9BW19	673 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	NOD2	Q9HC29	1040 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	LHX3	Q9UBR4	397 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	LHX6	Q9UPM6	363 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	FAM169A	Q9Y6X4	670 aa		13.54	□□□□□ -0.24
PPHLN1-223	ENST00000610488	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	LOC400499	M0QZD8	3231 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	IQANK1	A0A1B0GTG1	560 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	LOC285095	A0A1B0GVY8	99 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488		A0A1W2PR77	199 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CCDC78	A2IDD5	438 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	TAF4	O00268	1085 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	PLRG1	O43660	514 aa	Known RBP	13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	UGT1A9	O60656	530 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	FAM155B	O75949	473 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	ERVK-10	P10266	1014 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CREB1	P16220	341 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CR2	P20023	1033 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CES1	P23141	567 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SERPINH1	P50454	418 aa	Known RBP	13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	RHOA	P61586	193 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CDK18	Q07002	472 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	MGAT5	Q09328	741 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SEPT6	Q14141	434 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SLC14A2	Q15849	920 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	SIRPB2	Q5JXA9	342 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	AGBL4	Q5VU57	503 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	DHRS13	Q6UX07	377 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	GALNT15	Q8N3T1	639 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CNDP2	Q96KP4	475 aa	Known RBP	13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CAPS2	Q9BXY5	557 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	CNOT10	Q9H9A5	744 aa	Known RBP	13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	UGT1A7	Q9HAW7	530 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	UGT1A10	Q9HAW8	530 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	UGT1A8	Q9HAW9	530 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	IL1RAPL1	Q9NZN1	696 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	FCF1	Q9Y324	198 aa	Known RBP	13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	TCAF1	Q9Y4C2	921 aa		13.53	□□□□□ -0.24
PPHLN1-223	ENST00000610488	ZCWPW2	A0A1B0GU75	182 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488		K7ERQ8	282 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TLR4	O00206	839 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	KPNA3	O00505	521 aa	Predicted RBP	13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SLC7A4	O43246	635 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	MT-CO1	P00395	513 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SRC	P12931	536 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	BRAF	P15056	766 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	HLA-DPA1	P20036	260 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ADRA1D	P25100	572 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ARRB1	P49407	418 aa	Predicted RBP	13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	NXPH1	P58417	271 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	NAB1	Q13506	487 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	FRG1	Q14331	258 aa	Known RBP	13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	GALNT3	Q14435	633 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	SHB	Q15464	509 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	TTC19	Q6DKK2	380 aa	Predicted RBP	13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	C19orf48	Q6RUI8	117 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	MARK2	Q7KZI7	788 aa	Known RBP	13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	EID2	Q8N6I1	236 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	PTCD2	Q8WV60	388 aa	Known RBP	13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	NSMCE3	Q96MG7	304 aa		13.52	□□□□□ -0.25
PPHLN1-223	ENST00000610488	ZNF778	Q96MU6	729 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms