RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 PURAQ00577 322 aaKnown RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 GNA13Q14344 377 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 ZNF697Q5TEC3 545 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 HLA-DQA1Q5Y7H0 255 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 CDCA2Q69YH5 1023 aaPredicted RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 SPPL2CQ8IUH8 684 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 DBF4BQ8NFT6 615 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 PHF10Q8WUB8 498 aaKnown RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 AARSD1Q9BTE6 412 aaKnown RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 CADM1Q9BY67 442 aaKnown RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 LRTM1Q9HBL6 345 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 GRIN2DO15399 1336 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 NR2F1P10589 423 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 ZNF37AP17032 561 aaPredicted RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 DCTN2Q13561 401 aaKnown RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 FAM46CQ5VWP2 391 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 PRSS55Q6UWB4 352 aaPredicted RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 CNTD1Q8N815 330 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 FAM47BQ8NA70 645 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 LPGAT1Q92604 370 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 VMP1Q96GC9 406 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 FCF1Q9Y324 198 aaKnown RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 EOMESO95936 686 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 ADH1CP00326 375 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 UMPSP11172 480 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 ALOX12P18054 663 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 SLC1A2P43004 574 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 GUCA1AP43080 201 aaPredicted RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 HSPA7P48741 367 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 CCR4P51679 360 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 SKP1P63208 163 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 PRKCZQ05513 592 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 R3HCC1LQ7Z5L2 792 aaKnown RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 ZC3H3Q8IXZ2 948 aaKnown RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 ZNF540Q8NDQ6 660 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 ADCY4Q8NFM4 1077 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 CIB1Q99828 191 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 OXCT2Q9BYC2 517 aaPredicted RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 KLHL1Q9NR64 748 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 FKBPLQ9UIM3 349 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 CNTN6Q9UQ52 1028 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 SLC7A4O43246 635 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 ITGA2P17301 1181 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 RBM44Q6ZP01 1051 aaKnown RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 HEATR4Q86WZ0 1026 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 RALGPS2Q86X27 583 aaPredicted RBP14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 TBC1D21Q8IYX1 336 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 OR7A2PQ8NGA2 310 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 HBEGFQ99075 208 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 ATP6V1HQ9UI12 483 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 PTPRJQ12913 1337 aa14.19□□□□□ -0.14
PCDHB16-201ENST00000609684 C9IYK1 514 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 KPNA4O00629 521 aaPredicted RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 CCL16O15467 120 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 GJA9P57773 515 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 SLC25A11Q02978 314 aaKnown RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 KIAA0930Q6ICG6 404 aaPredicted RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 SLC47A1Q96FL8 570 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 DNAJC11Q9NVH1 559 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 ADGRE2Q9UHX3 823 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 UBXN8O00124 270 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 NUDT14O95848 222 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 PDZK1Q5T2W1 519 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 SWT1Q5T5J6 900 aaKnown RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 IL23RQ5VWK5 629 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 TRIM40Q6P9F5 258 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 ARL14EPQ8N8R7 260 aaPredicted RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 BRSK1Q8TDC3 778 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 FUBP3Q96I24 572 aaKnown RBP eCLIP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 REXO4Q9GZR2 422 aaKnown RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 LYVE1Q9Y5Y7 322 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 U3KQV3 271 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 IQCF5A8MTL0 148 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 ISM1B1AKI9 464 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 CDK14O94921 469 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 SCNN1AP37088 669 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 LSM3P62310 102 aaKnown RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 TIMM50Q3ZCQ8 353 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 ANXA8L1Q5VT79 327 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 ZDHHC20Q5W0Z9 365 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 GLYATQ6IB77 296 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 UNC5BQ8IZJ1 945 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 PPCDCQ96CD2 204 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 CLK4Q9HAZ1 481 aaKnown RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 SGK2Q9HBY8 427 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 HMG20AQ9NP66 347 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 ZNF358Q9NW07 568 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 NUDT4Q9NZJ9 180 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 ZNF232Q9UNY5 417 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 ZNF142P52746 1687 aaPredicted RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 EME2A4GXA9 379 aaPredicted RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 GTF2E2P29084 291 aaKnown RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 KHDC1Q4VXA5 237 aaKnown RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 GPAT3Q53EU6 434 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 TRIQKQ629K1 86 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 ZNF655Q8N720 491 aaPredicted RBP14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 OR2T34Q8NGX1 318 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 OR2T3Q8NH03 318 aa14.18□□□□□ -0.14
PCDHB16-201ENST00000609684 DCAKDQ8WVC6 231 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms