RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 DCST1Q5T197 706 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 TSPAN33Q86UF1 283 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 TMTC2Q8N394 836 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 CLIP4Q8N3C7 705 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 POC5Q8NA72 575 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 B4GALNT2Q8NHY0 566 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 WFIKKN2Q8TEU8 576 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 APBB2Q92870 758 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 ORAI1Q96D31 301 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 MTBPQ96DY7 904 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 GRAMD2BQ96HH9 432 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 CSF3RQ99062 836 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 GAD1Q99259 594 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 SEZ6LQ9BYH1 1024 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 SEBOXQ9HB31 216 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 MTMR10Q9NXD2 777 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 UBA2Q9UBT2 640 aaPredicted RBP4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 ACSL5Q9ULC5 683 aa4.28□□□□□ -1.72
SMCHD1-213ENST00000609587 TTC3P53804 2025 aa4.28□□□□□ -1.73
SMCHD1-213ENST00000609587 IGLV5-52A0A0A0MRZ9 124 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 ERVV-2B6SEH9 535 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 CTDSP2O14595 271 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 TMCC2O75069 709 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 ICAM1P05362 532 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 IGHV4-30-4P0DP06 118 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 SRCP12931 536 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 SAT1P21673 171 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 ACADLP28330 430 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 CDKN2AP42771 156 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 SLC15A1P46059 708 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 GPR143P51810 404 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 SEC61BP60468 96 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 MRPS5P82675 430 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 ECT2LQ008S8 904 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 EGR4Q05215 589 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 SREBF2Q12772 1141 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 CDC16Q13042 620 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 MAD2L1Q13257 205 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 KRTAP27-1Q3LI81 207 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 ATP13A5Q4VNC0 1218 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 XKR9Q5GH70 373 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 FRG2Q64ET8 278 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 TMEM198Q66K66 360 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 RGMBQ6NW40 437 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 BEST3Q8N1M1 668 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 PGBD5Q8N414 524 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 IQCF1Q8N6M8 205 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 PCDH20Q8N6Y1 951 aaKnown RBP4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 OR1J2Q8NGS2 313 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 TRPC4APQ8TEL6 797 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 TMED6Q8WW62 240 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 PHF21BQ96EK2 531 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 OR1F2PQ96R84 312 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 NUDCD1Q96RS6 583 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 TEX12Q9BXU0 123 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 SIL1Q9H173 461 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 MAGIXQ9H6Y5 334 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 EPB41L5Q9HCM4 733 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 WNT16Q9UBV4 365 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 STK39Q9UEW8 545 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 CHORDC1Q9UHD1 332 aaPredicted RBP4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 TTLL3Q9Y4R7 772 aa4.27□□□□□ -1.73
SMCHD1-213ENST00000609587 ARHGEF40Q8TER5 1519 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 GOLGA6L9A6NEM1 432 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 EIF4E1BA6NMX2 242 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 HS3ST1O14792 307 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 MITFO75030 526 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 TUBBP07437 444 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 ACAA1P09110 424 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 SELLP14151 372 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 AKR1B1P15121 316 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 MSH2P43246 934 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 NRIP1P48552 1158 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 PEX5P50542 639 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 CLCNKAP51800 687 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 PSMC6P62333 389 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 NUCB1Q02818 461 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 GRSF1Q12849 480 aaKnown RBP eCLIP4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 OASLQ15646 514 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 CALCRLQ16602 461 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 NTRK2Q16620 822 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 RARS2Q5T160 578 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 ZNF280DQ6N043 979 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 PDXDC1Q6P996 788 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 KRBA2Q6ZNG9 492 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 ARID3BQ8IVW6 561 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 CHERPQ8IWX8 916 aaKnown RBP4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 NME8Q8N427 588 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 ZBTB8BQ8NAP8 495 aaPredicted RBP4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 OR2AK2Q8NG84 335 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 HM13Q8TCT9 377 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 MAGEC3Q8TD91 643 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 ELP5Q8TE02 316 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 HRH4Q9H3N8 390 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 PDE7BQ9NP56 450 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 PLSCR4Q9NRQ2 329 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 ANKEF1Q9NU02 776 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 OCIAD1Q9NX40 245 aa4.26□□□□□ -1.73
SMCHD1-213ENST00000609587 SEC63Q9UGP8 760 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms