RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 NAT8LQ8N9F0 302 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 MNS1Q8NEH6 495 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 OR13C4Q8NGS5 318 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 ZNF398Q8TD17 642 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 SETD7Q8WTS6 366 aaKnown RBP14.15□□□□□ -0.14
CTSA-219ENST00000607841 PEX13Q92968 403 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 TSACCQ96A04 125 aaPredicted RBP14.15□□□□□ -0.14
CTSA-219ENST00000607841 FRMD8Q9BZ67 464 aaPredicted RBP14.15□□□□□ -0.14
CTSA-219ENST00000607841 RMI1Q9H9A7 625 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 TRIM39Q9HCM9 518 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 FGF22Q9HCT0 170 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 NLE1Q9NVX2 485 aaPredicted RBP14.15□□□□□ -0.14
CTSA-219ENST00000607841 VPS18Q9P253 973 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 KLF15Q9UIH9 416 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 FKBPLQ9UIM3 349 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 RIMKLBQ9ULI2 386 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 CNOT6Q9ULM6 557 aaKnown RBP14.15□□□□□ -0.14
CTSA-219ENST00000607841 KCTD3Q9Y597 815 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 CSNK1G3Q9Y6M4 447 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 SLC30A1Q9Y6M5 507 aa14.15□□□□□ -0.14
CTSA-219ENST00000607841 FAM186AA6NE01 2351 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 PRSS38A1L453 326 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 MAGEB16A2A368 324 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 GPR89AB7ZAQ6 455 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 H7C0S8 307 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 AQP9O43315 295 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 SDC3O75056 442 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 SRP72O76094 671 aaKnown RBP14.14□□□□□ -0.15
CTSA-219ENST00000607841 IVLP07476 585 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 GPR89BP0CG08 455 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 ITGALP20701 1170 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 C2orf54Q08AI8 447 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 ELOCQ15369 112 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 ATP13A5Q4VNC0 1218 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 CCDC38Q502W7 563 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 PRRT3Q5FWE3 981 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 LDLRAP1Q5SW96 308 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 TSTD2Q5T7W7 516 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 RNASEH2BQ5TBB1 312 aaKnown RBP14.14□□□□□ -0.15
CTSA-219ENST00000607841 ANKRD22Q5VYY1 191 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 IZUMO3Q5VZ72 239 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 DOK6Q6PKX4 331 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 GATAD2AQ86YP4 633 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 NAXDQ8IW45 347 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 BBOF1Q8ND07 529 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 ZNF548Q8NEK5 533 aaPredicted RBP14.14□□□□□ -0.15
CTSA-219ENST00000607841 GDAP1Q8TB36 358 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 LMX1AQ8TE12 382 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 RHBDD1Q8TEB9 315 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 PTCD2Q8WV60 388 aaKnown RBP14.14□□□□□ -0.15
CTSA-219ENST00000607841 OR1E3Q8WZA6 343 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 ULK4Q96C45 1275 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 PDXPQ96GD0 296 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 CDKN2AIPNLQ96HQ2 116 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 DNAJC1Q96KC8 554 aaKnown RBP14.14□□□□□ -0.15
CTSA-219ENST00000607841 TTC25Q96NG3 672 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 DUSP23Q9BVJ7 150 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 ZCCHC2Q9C0B9 1178 aaKnown RBP14.14□□□□□ -0.15
CTSA-219ENST00000607841 ASB8Q9H765 288 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 CARS2Q9HA77 564 aaKnown RBP14.14□□□□□ -0.15
CTSA-219ENST00000607841 CYP4F12Q9HCS2 524 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 SMOXQ9NWM0 555 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 DOLKQ9UPQ8 538 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 TMEM98Q9Y2Y6 226 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 TCAF1Q9Y4C2 921 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 MRFAP1Q9Y605 127 aa14.14□□□□□ -0.15
CTSA-219ENST00000607841 CFAP54Q96N23 3096 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 SDR42E2A6NKP2 422 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 EFCAB8A8MWE9 144 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 TM4SF5O14894 197 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 SCAMP1O15126 338 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 VEGFDO43915 354 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 SH3BP5O60239 455 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 TMEM63AO94886 807 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 CSRP1P21291 193 aaKnown RBP14.13□□□□□ -0.15
CTSA-219ENST00000607841 PSMA3P25788 255 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 MGAT1P26572 445 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 MC4RP32245 332 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 GNPDA1P46926 289 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 POLD2P49005 469 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 XIAPP98170 497 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 NFATC2Q13469 925 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 GTF2H3Q13889 308 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 PUM1Q14671 1186 aaKnown RBP eCLIP14.13□□□□□ -0.15
CTSA-219ENST00000607841 MORF4L2Q15014 288 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 GPR33Q49SQ1 333 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 ZNF534Q76KX8 674 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 SNX20Q7Z614 316 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 TRIM74Q86UV6 250 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 GKN2Q86XP6 184 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 GALNT13Q8IUC8 556 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 RBFAQ8N0V3 343 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 SLC25A45Q8N413 288 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 SCG3Q8WXD2 468 aaKnown RBP14.13□□□□□ -0.15
CTSA-219ENST00000607841 SCARF2Q96GP6 870 aaPredicted RBP14.13□□□□□ -0.15
CTSA-219ENST00000607841 SNF8Q96H20 258 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 SERPINB12Q96P63 405 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 CDC6Q99741 560 aa14.13□□□□□ -0.15
CTSA-219ENST00000607841 MRM3Q9HC36 420 aaKnown RBP14.13□□□□□ -0.15
CTSA-219ENST00000607841 MRPL40Q9NQ50 206 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms